Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq161 159 3e-34 seq21 104 2e-17 seq26 95.1 1e-14 >seq161 Length=251022 Score = 159 bits (176), Expect = 3e-34 Identities = 363/536 (68%), Gaps = 9/536 (2%) Strand=Plus/Minus Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAG 47105 || || |||| |||| | ||| || ||| | ||||||||||| |||||| | ||| Sbjct 93371 CTCTTCAACGCCATCGACAACATTCCTTGCATCAAGAGAAAGGCCGACTGGGCCCTCAAG 93312 Query 47106 TACAT-TGAAA-ACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCG 47163 | || || | | | | || || | |||| | || ||||| ||||||||| ||||| Sbjct 93311 TGGATCTGCGACAAGGACTCGACATT-TGGCTGC-CGCTTGATTGCTTTCGCCGCCGTCG 93254 Query 47164 AGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTA 47223 |||| |||||||||| ||| ||| || | || || | | || | || | | Sbjct 93253 AGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCA 93194 Query 47224 TGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACT 47283 ||||||| || || || ||||||||| ||||| | || || || |||||||| ||| Sbjct 93193 TGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTATGCACACCGACT 93134 Query 47284 TTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTGGACG-TGCCCACCGTCAGC 47342 | ||||| ||| || || | || || | | ||| | ||| | | ||| || Sbjct 93133 TCGCCTGCCTC--CTCCA-CTCTCACCTCAAGAACAAGCCCTCTGCTGCTCTC-GTCCGC 93078 Query 47343 GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAA 47402 || || | |||| || ||||| || ||| ||||| || | || ||||| ||| Sbjct 93077 GAGATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAGATGCTCTTCCCTGT 93018 Query 47403 TCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGC 47462 || | | || |||||||| || | ||| | | |||||||| |||||||| |||||| Sbjct 93017 GCTCTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCGC 92958 Query 47463 CTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATG 47522 |||||| | || | |||||||| ||||| || || || ||||| || ||| Sbjct 92957 CTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAACCCCTTCGACTTCATG 92898 Query 47523 AACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 | ||||| ||| | | |||||||||||||| ||||||||| | || || || || Sbjct 92897 GAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGTGACTA 92842 >seq21 Length=270181 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| ||| | || || ||| || ||||| || ||| Sbjct 161229 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCA 161288 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| || || || ||||||||||||||| ||| ||| |||| Sbjct 161289 GCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 161348 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| || | || | || |||||||| || || Sbjct 161349 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTC 161408 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 161409 TTGACGAAGATCTGCAT 161425 Score = 100 bits (110), Expect = 3e-16 Identities = 169/241 (70%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 126874 TTACTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAAT 126933 || || ||||| || || || | || | |||||| || | || ||||| || || || Sbjct 160959 TTGCTCTACTGA-CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGAT 161017 Query 126934 ATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTG 126993 ||||| || | ||| ||| || || | ||| ||||| ||| |||||| ||||| Sbjct 161018 GTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTG 161077 Query 126994 CTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGT 127052 ||| || || || || |||||||||||| ||| ||| ||||| |||| |||| ||||| Sbjct 161078 CTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG-TCGATGGTGT 161136 Query 127053 CCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 127112 | | || ||||| | || | || || || || ||||| || || || ||||||| Sbjct 161137 CTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCA 161196 Query 127113 T 127113 | Sbjct 161197 T 161197 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| |||| | |||||| || || ||||| || ||| Sbjct 161457 GTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCA 161516 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | ||||||||||| ||||| ||||| |||||||| ||| || |||| Sbjct 161517 GCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTG 161576 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089 | |||| || | |||||| | |||||| || | ||| | || |||||||| Sbjct 161577 ACGTTG-TCAATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 161629 >seq26 Length=70271 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| ||||| Sbjct 12783 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTTCCG 12842 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| ||||| || || || || ||||||||||||||| ||| || |||| Sbjct 12843 GCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 12902 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | |||||| || | ||| | || ||||| || || || Sbjct 12903 ACGTTG-TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGT 12961 Query 127096 TTTTACAAA 127104 || || || Sbjct 12962 CTTGACGAA 12970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499807392080