Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq161 159 3e-34
seq21 104 2e-17
seq26 95.1 1e-14
>seq161
Length=251022
Score = 159 bits (176), Expect = 3e-34
Identities = 363/536 (68%), Gaps = 9/536 (2%)
Strand=Plus/Minus
Query 47046 CTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAG 47105
|| || |||| |||| | ||| || ||| | ||||||||||| |||||| | |||
Sbjct 93371 CTCTTCAACGCCATCGACAACATTCCTTGCATCAAGAGAAAGGCCGACTGGGCCCTCAAG 93312
Query 47106 TACAT-TGAAA-ACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCG 47163
| || || | | | | || || | |||| | || ||||| ||||||||| |||||
Sbjct 93311 TGGATCTGCGACAAGGACTCGACATT-TGGCTGC-CGCTTGATTGCTTTCGCCGCCGTCG 93254
Query 47164 AGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTA 47223
|||| |||||||||| ||| ||| || | || || | | || | || | |
Sbjct 93253 AGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTCA 93194
Query 47224 TGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACT 47283
||||||| || || || ||||||||| ||||| | || || || |||||||| |||
Sbjct 93193 TGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGGTATGCACACCGACT 93134
Query 47284 TTGCCTGTCTCTACTACAACACTAGAGTCGATCAAAAGTTGGACG-TGCCCACCGTCAGC 47342
| ||||| ||| || || | || || | | ||| | ||| | | ||| ||
Sbjct 93133 TCGCCTGCCTC--CTCCA-CTCTCACCTCAAGAACAAGCCCTCTGCTGCTCTC-GTCCGC 93078
Query 47343 GACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAA 47402
|| || | |||| || ||||| || ||| ||||| || | || ||||| |||
Sbjct 93077 GAGATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAGATGCTCTTCCCTGT 93018
Query 47403 TCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGC 47462
|| | | || |||||||| || | ||| | | |||||||| |||||||| ||||||
Sbjct 93017 GCTCTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGAGTTTGTCGCTGACCGC 92958
Query 47463 CTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATG 47522
|||||| | || | |||||||| ||||| || || || ||||| || |||
Sbjct 92957 CTGCTCCTCGCTCTCGGCGAGCCCAAGATCTACCAAGCCACCAACCCCTTCGACTTCATG 92898
Query 47523 AACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
| ||||| ||| | | |||||||||||||| ||||||||| | || || || ||
Sbjct 92897 GAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGAGAGTTGGTGACTA 92842
>seq21
Length=270181
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || || || ||||| ||| | || || ||| || ||||| || |||
Sbjct 161229 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCA 161288
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| |||||||| || || || ||||||||||||||| ||| ||| ||||
Sbjct 161289 GCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTG 161348
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | |||||| || | || | || |||||||| || ||
Sbjct 161349 ACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTC 161408
Query 127097 TTTACAAAAATCTGCAT 127113
|| || || ||||||||
Sbjct 161409 TTGACGAAGATCTGCAT 161425
Score = 100 bits (110), Expect = 3e-16
Identities = 169/241 (70%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 126874 TTACTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAAT 126933
|| || ||||| || || || | || | |||||| || | || ||||| || || ||
Sbjct 160959 TTGCTCTACTGA-CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGAT 161017
Query 126934 ATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTG 126993
||||| || | ||| ||| || || | ||| ||||| ||| |||||| |||||
Sbjct 161018 GTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTG 161077
Query 126994 CTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGT 127052
||| || || || || |||||||||||| ||| ||| ||||| |||| |||| |||||
Sbjct 161078 CTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG-TCGATGGTGT 161136
Query 127053 CCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 127112
| | || ||||| | || | || || || || ||||| || || || |||||||
Sbjct 161137 CTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCA 161196
Query 127113 T 127113
|
Sbjct 161197 T 161197
Score = 86.0 bits (94), Expect = 6e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || || || ||||| |||| | |||||| || || ||||| || |||
Sbjct 161457 GTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCA 161516
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||| | ||||||||||| ||||| ||||| |||||||| ||| || ||||
Sbjct 161517 GCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTG 161576
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| |||| || | |||||| | |||||| || | ||| | || ||||||||
Sbjct 161577 ACGTTG-TCAATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 161629
>seq26
Length=70271
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| | ||||| ||| || ||||| |||||
Sbjct 12783 GTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTTCCG 12842
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||||| ||||| || || || || ||||||||||||||| ||| || ||||
Sbjct 12843 GCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTG 12902
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| |||||| | |||||| || | ||| | || ||||| || || ||
Sbjct 12903 ACGTTG-TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGT 12961
Query 127096 TTTTACAAA 127104
|| || ||
Sbjct 12962 CTTGACGAA 12970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499807392080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |