Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq21 154 3e-32
seq26 141 2e-28
>seq21
Length=270181
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|||||||| || || | |||||| || |||||||| |||| ||||||||||| | ||
Sbjct 160977 CGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTA 161036
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || |||| |||||||||||||||||| || |||||||||||||| || ||
Sbjct 161037 CGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCC 161096
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| ||| |||| |||||||| || ||| || |||||
Sbjct 161097 TCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAAT 161156
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || ||||| || || || || ||
Sbjct 161157 GTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTG 161194
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| ||||||||||| || ||||| |||| ||||||||| | | |||
Sbjct 161205 CGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTA 161264
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| || |||||||| || ||||||||||| || ||| ||
Sbjct 161265 CGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCC 161324
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| |||||| | | || || || |
Sbjct 161325 TCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGA 161384
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || ||||| || || || || || ||
Sbjct 161385 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 161422
Score = 114 bits (126), Expect = 3e-20
Identities = 147/200 (74%), Gaps = 2/200 (1%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAA-AGT 199467
||||| | ||||| ||||||||||| || ||||| |||| ||||||||| || || ||
Sbjct 161433 CGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTC-GCTAAGGGT 161491
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
| || || || |||||||| || || |||||||| |||||||| |||||| ||| ||
Sbjct 161492 GCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCC 161551
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
||| || || ||||| ||| ||| || | |||||| | || || || || |
Sbjct 161552 TTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACCTCAAG 161611
Query 199588 CGTGATCGTCTTACCCGTGA 199607
||||| ||||| || ||||
Sbjct 161612 GGTGATGGTCTTGCCGGTGA 161631
>seq26
Length=70271
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| |||||||||||||| |||| ||||||||| | | ||| | |||||
Sbjct 12768 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 12827
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||||||||| || ||||| |||||||| ||| || || |||
Sbjct 12828 TCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 12887
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| |||||| | | || || || | ||||| |||
Sbjct 12888 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 12947
Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620
|| ||||| || || || || ||
Sbjct 12948 TTGCCCGTAAGGGTCTTGACGAA 12970
Score = 87.8 bits (96), Expect = 4e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994
|| |||||||||||||||||| | || ||||| | ||| | |||| |||||| |||||
Sbjct 12853 CTGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAG 12794
Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017
|| ||||| ||||||||||||||
Sbjct 12793 AAGGAGTCGACTCTTCACCTTGT 12771
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178919077476189
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |