Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq21 154 3e-32 seq26 141 2e-28 >seq21 Length=270181 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| || || | |||||| || |||||||| |||| ||||||||||| | || Sbjct 160977 CGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTA 161036 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||| |||||||||||||||||| || |||||||||||||| || || Sbjct 161037 CGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCC 161096 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||||| || ||| || ||||| Sbjct 161097 TCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAAT 161156 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| || || || || || Sbjct 161157 GTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTG 161194 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| ||||||||||| || ||||| |||| ||||||||| | | ||| Sbjct 161205 CGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTA 161264 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || |||||||| || ||||||||||| || ||| || Sbjct 161265 CGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCC 161324 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | || || || | Sbjct 161325 TCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGA 161384 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| || || || || || || Sbjct 161385 GTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 161422 Score = 114 bits (126), Expect = 3e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAA-AGT 199467 ||||| | ||||| ||||||||||| || ||||| |||| ||||||||| || || || Sbjct 161433 CGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTC-GCTAAGGGT 161491 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | || || || |||||||| || || |||||||| |||||||| |||||| ||| || Sbjct 161492 GCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCC 161551 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || || ||||| ||| ||| || | |||||| | || || || || | Sbjct 161552 TTCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACCTCAAG 161611 Query 199588 CGTGATCGTCTTACCCGTGA 199607 ||||| ||||| || |||| Sbjct 161612 GGTGATGGTCTTGCCGGTGA 161631 >seq26 Length=70271 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| |||||||||||||| |||| ||||||||| | | ||| | ||||| Sbjct 12768 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 12827 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| || ||||| |||||||| ||| || || ||| Sbjct 12828 TCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 12887 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| |||||| | | || || || | ||||| ||| Sbjct 12888 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 12947 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || ||||| || || || || || Sbjct 12948 TTGCCCGTAAGGGTCTTGACGAA 12970 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 || |||||||||||||||||| | || ||||| | ||| | |||| |||||| ||||| Sbjct 12853 CTGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAG 12794 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 || ||||| |||||||||||||| Sbjct 12793 AAGGAGTCGACTCTTCACCTTGT 12771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919077476189