Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq21 138 1e-27 seq26 129 7e-25 seq24 93.3 5e-14 >seq21 Length=270181 Score = 138 bits (152), Expect = 1e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| ||||| || | || || ||||||||||| ||||| Sbjct 161235 TCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAG 161294 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| |||||||||||| | || | || |||||||||| ||||||| ||||| | Sbjct 161295 ATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTG 161354 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| ||| || || || | |||||||| ||||| || || || || || Sbjct 161355 TCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACG 161414 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 161415 AAGATCTGCAT 161425 Score = 129 bits (142), Expect = 7e-25 Identities = 146/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || |||| || | |||||| |||||||| Sbjct 161006 CTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAA 161065 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | | |||||||||| ||||||| ||||| ||| Sbjct 161066 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGA-CGT 161124 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| |||||||| |||| |||||||| || || || || || || | Sbjct 161125 TGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGA 161184 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 161185 CGAAGATCTGCAT 161197 Score = 98.7 bits (108), Expect = 1e-15 Identities = 124/168 (74%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||| || ||||| |||| |||||||||||||| || || Sbjct 161463 TCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAG 161522 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||| || | || | || |||||||| |||||| |||||| ||| Sbjct 161523 ATGAGGCGCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGCTCTTGA-CGTT 161581 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | |||||| || || || || | |||||||| ||||| || Sbjct 161582 GTCAATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGT 161629 >seq26 Length=70271 Score = 129 bits (142), Expect = 7e-25 Identities = 141/185 (76%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| |||||||| | || || |||||||| |||||||| Sbjct 12788 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAA 12847 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||| ||||| | || | || |||||||||| |||||| |||||| ||| Sbjct 12848 GATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 12906 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | |||||||| |||||||| || || || | Sbjct 12907 TGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGA 12966 Query 46581 CAAAG 46585 | ||| Sbjct 12967 CGAAG 12971 >seq24 Length=268411 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||||||||| || || || | || |||||||||||||| Sbjct 107869 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCA 107928 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||| |||| |||||| ||||| | || | | ||||||||| Sbjct 107929 GCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 107972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237220064840