Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq161 307 1e-78 seq26 123 2e-23 seq21 120 3e-22 seq24 87.8 2e-12 >seq161 Length=251022 Score = 307 bits (340), Expect = 1e-78 Identities = 594/866 (69%), Gaps = 13/866 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || || || || || || | ||||| || || || || || || | Sbjct 92823 CATGACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGC 92882 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 ||| || ||| | ||| || || |||||||||| | | |||| ||||| || Sbjct 92883 CAACGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGCTCGCC 92942 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAAT 132769 || ||| |||||| | ||| || || |||||||||||||| ||||| | || || | Sbjct 92943 GAGAGCGAGGAGCAGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGTT 93002 Query 132770 TAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | || || ||| |||| || | | || || | | || ||||||||| ||||| Sbjct 93003 CATG-CCGAGAAGA-GCACAGGGAAGAGCATCTGACAAGAACTCTTGCTCGATAGCGACA 93060 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAAC 132888 || ||||||| ||| || | ||| | || || ||| | | | || | Sbjct 93061 GCCTCGGTGATGATCTCGCGGACGAGAGCAGCAGAGGGCTTGTTCTTGAGGTGAGAGTGG 93120 Query 132889 ATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA 132948 | | ||| || |||||| |||| ||||| || | || ||||| |||||| ||| Sbjct 93121 AGGAGGCAGGCGAAGTCGGTGTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAG 93180 Query 132949 GTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAA 133008 || | ||||||||||| || || || |||||||| || |||| ||||| ||| || Sbjct 93181 GTAAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAG 93240 Query 133009 AAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTG 133068 ||||||| ||||||||||| |||||||| | || ||| ||| || || | || ||| Sbjct 93241 AAGAAGATACCCTCGACGGCGGCGAAAGCAATCAAGCGGCAGCCAAATGTCGAGTCCTTG 93300 Query 133069 CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATG 133128 | |||||| || ||||| ||||||||| |||| ||| || || | |||||| Sbjct 93301 TCGCAGATCCACTTGAGGGCCCAGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATG 93360 Query 133129 GCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAGGGTCG 133186 ||||| | | | | || | | | | || ||| | ||| ||||||||||| | Sbjct 93361 GCGTTGA--AGAGGTAGGTACGTTGCTTGGGCTCGCTAATGTATGTGTCGATGAGCAATG 93418 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 | || | || ||||| | ||||||||| |||||| || ||||| || || | |||| Sbjct 93419 AGTAGGTCTCGGAGTGGATGTTCTCCATCATGATTTGGAAACCGTAGAAACATCTGGCCT 93478 Query 133247 CGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305 || | ||| || || |||| |||||||||||| || || ||||||||||| ||||| Sbjct 93479 CGGGGATCTGAACCTC-AGAGCTGAAACGCTCGACAAGGTTCTCGTTGACGATACCGTCA 93537 Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG- 133364 ||| ||||| ||||| || ||||| |||||| ||||||| |||||| | || Sbjct 93538 GAGGCAGCGAAGAAGGCGAGGACGTGAGAGATGAAGAATCGCTCGTCGTCGTTGAGACGT 93597 Query 133365 --CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCC 133422 | ||||||| | |||||||| || || | ||||||| ||||||| || || || Sbjct 93598 CTGTTCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCGGCGGTCCAGAAAGAGGCT 93657 Query 133423 TCGGCTTTTTTGTACATACTCCACAT 133448 ||||| || |||||||| |||| || Sbjct 93658 TCGGCCTTCTTGTACATGTTCCAAAT 93683 >seq26 Length=70271 Score = 123 bits (136), Expect = 2e-23 Identities = 155/209 (74%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || | |||| | | Sbjct 12970 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCATC 12911 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| |||||| | ||||||||||| | Sbjct 12910 GACAACG--TCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCC 12853 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| || || ||||| || || | ||||| || ||||||||||||||| | Sbjct 12852 TGATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGA 12793 Query 38431 AGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| |||| || || | || || ||| Sbjct 12792 AGGAGTCGACTCTTCACCTTGTCCTCCGT 12764 >seq21 Length=270181 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| | || |||||| | || Sbjct 161425 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 161366 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| |||||| | ||||| Sbjct 161365 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 161306 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 161305 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 161246 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || | || || ||| Sbjct 161245 ATCCAGAAGGAATCCACTCTCCACCTCGTCCTCCGT 161210 Score = 114 bits (126), Expect = 1e-20 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || |||||| | |||||| | | | |||| | || Sbjct 161631 TCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACCATTGACAACG--TCAA 161574 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 || || |||| ||||| || || ||||| | || || ||||| ||||| | || || Sbjct 161573 GAGCAAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCTGG 161514 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443 ||| ||||| || |||| |||||||| | ||||||||||||||| |||||| | || || Sbjct 161513 CAAGCAGCTCGAGGACGGTCGCACCCTTAGCGACTACAACATCCAGAAGGAATCCACTCT 161454 Query 38444 GCATTTGGTGCTGCGT 38459 || | || || ||| Sbjct 161453 CCACCTCGTCCTCCGT 161438 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || |||||||| | || || || | | Sbjct 161197 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 161138 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| || ||| | ||||| Sbjct 161137 GACACCATCGACAACG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 161079 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||| |||| |||| || || ||| |||||||| Sbjct 161078 GCAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAA 161019 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 |||||| ||||| | || || || |||||||| Sbjct 161018 CATCCAGAAGGAGTCAACCCTCCACTTGGTGCT 160986 >seq24 Length=268411 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||||||||| || || | ||| ||||| ||||| || Sbjct 107972 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 107913 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 || | || |||||| ||||||||||||||| ||||| Sbjct 107912 GATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGA 107875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171755889280