Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq85 194 2e-44 seq161 127 3e-24 seq74 100 4e-16 seq24 91.5 2e-13 >seq85 Length=501717 Score = 194 bits (214), Expect = 2e-44 Identities = 900/1400 (64%), Gaps = 45/1400 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||| ||||||| || || |||| ||||| || || || ||||| ||| Sbjct 351295 CCCCAGCAGATGATCATGCGTGTTGCTGTCGGCATCCACGGCGAGGACATTGAGGCTGCC 351236 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | || |||||| || |||||| | ||| |||| |||||| | || || || || Sbjct 351235 ATCGAAACATACAACTTGATGTCGCTCAAGTAC-TTCACCCACGCCTCGCCTACTCTGTT 351177 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 || ||| || || || || || | | || ||||| || | | ||||| || Sbjct 351176 CAGCGCCGGCACTCCCCAGCCTCAGCTCGCTTCATGCTTCCTGATCGACATGAAGGATGA 351117 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| || | || || |||| ||| |||| || ||| ||||| ||| ||||| Sbjct 351116 TTCGATTGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCGAAGAACGCTGG 351057 Query 111851 TGGTATCGGGATGCACATCCA-TGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAA 111909 |||||| || | || || || || | |||| ||| || ||||| | Sbjct 351056 TGGTATTGGTCTCAACGCTCACTGCATTC-GTGCCACTGGCTCTTACATCGCTGGTACCA 350998 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | ||| || | ||| || |||| ||||| || || || ||| ||| || | |||| Sbjct 350997 ACGGTACCTCGAACGGTCTTGTTCCCATGCTCCGTGTCTTCAACAACACTGCCAGATATG 350938 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | |||| | ||| ||||| | || | |||| |||| || ||||| |||| Sbjct 350937 TTGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCCATCTACCTCGAGCCTTGGC 350881 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| ||| || | | ||||| || | || ||||| || | ||||||| || | Sbjct 350880 ACGCTGATGTCTTCGCTTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCG-T 350822 Query 112084 GC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 || ||||| ||||||| ||| |||||||| || ||||||||||||||| | || ||| | Sbjct 350821 GCTCGCGACCTCTTCTACGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTGGAGCAA 350762 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGT 112202 | || ||| |||| | || || | || || ||||| |||||| | ||| Sbjct 350761 AACTCCACCTGGACTCTGATGTGCCCCAGCGAGTGCCCTGGTCTTGCCGATGTCTACGGT 350702 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG--ACGG 112260 || ||||| || ||| | ||| ||||||||| || |||| | | | ||| || Sbjct 350701 GATGAGTTCGAGGCCTTGTACGAGAAGTACGAGCGCGAGGGTCGTG-GTC-GCGACACCA 350644 Query 112261 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | | ||| | || | | ||| | || || ||| || |||||||||||||||||| || Sbjct 350643 TCCGCGCT-CAGAAGCTCTGGTACGCCATCCTCGAGGCTCAAACCGAGACTGGTAACCCT 350585 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||| ||||| || || || |||| ||||| || || ||||| | ||||| || Sbjct 350584 TTCATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTGTCATT 350525 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || |||||| | || || || || | || | || | |||||| || || Sbjct 350524 CGCAGCTCCAACTTGTGCACCGAGATTATCGAGTACACCGCTCCCGATGAGGTTGCCGTC 350465 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACATTTG 112497 || ||| | || || | || || |||| | || || || || | ||| || | Sbjct 350464 TGCAACTTGGCTTCTCTTGCCCTTCCCACCTTCGTCGA--CATGAACGAGGAGAAGTTCG 350407 Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557 ||| | || |||||||| ||| | ||||| || ||| | |||| | || | Sbjct 350406 ATTTCAAGAAGCTCCACGAGGTTGTTCAGGTCGTCACCAAGAACTTGAACAAGATCATCG 350347 Query 112558 ATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 | | || ||||| || |||| ||||| || ||| | | |||||||| | Sbjct 350346 AGATCAACCACTACCCTGTCCCTGAG---GCTCGCAAGAGTAACTTCCGCCACCGTCCCA 350290 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGCATTT- 112670 | ||||||||||| ||||| || |||| | ||| ||| || || || ||| Sbjct 350289 TCGGTCTCGGTGTTAGTGGTCTTGCCGATG----CCTTCCTTGCCCTCCGCATGCCTTTC 350234 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || || ||| || | | |||| | || || ||||| || |||||||| ||| Sbjct 350233 GACTCACCCGAGGCTAGACAGCTCAACATCCAGATCTTCGAGACCATCTATCACGCTGCT 350174 Query 112731 CTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 |||| || || || ||||| ||| || || || || |||| || || Sbjct 350173 -TTGACTGCATCTTGCGACTTGGCTGAGAAGCTCGGCCCTTACGAGACCTACCCTGGCTC 350115 Query 112790 TCCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCAC 112847 || | || |||||| | ||| || | |||||||||| || | || | || | Sbjct 350114 CCCCGTGTC-CAAGGGCGAGCTCCAGTACGATATGTGGG-GCGTCACTCCCTCCGATCTC 350057 Query 112848 TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 112907 | |||||||| ||||| ||||| ||| || | ||| |||| ||| || | Sbjct 350056 TGGGACTGGGAGGCTCTGAAGGAGAAGATCGCCAAGGATGGTGTTCGCAACTCGCTACTC 349997 Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967 | || || ||||| || ||| ||| | || ||| |||| || |||||||| || Sbjct 349996 GTTGCCCCCATGCCCACTGCCAGTACCTCGCAGATCATGGGCTTCAACGAATGCTTCGAG 349937 Query 112968 CCCTACACGACGAACATCTA 112987 |||||||| | |||||||| Sbjct 349936 CCCTACACCTCTAACATCTA 349917 >seq161 Length=251022 Score = 127 bits (140), Expect = 3e-24 Identities = 169/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCA-AACAGTTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGA 102147 ||||| | |||||| | |||| |||| || || ||| |||||| | || ||||| | | Sbjct 93371 CTCTTCAACGCCATCGACAACA-TTCCTTGCAT-CAAGAGAAAGGCCGACTGGGCCCTCA 93314 Query 102148 AGTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||||| | || |||| | | || || |||| || | | || || || || Sbjct 93313 AGTGGATCTGCGACAAGGACTCGACATTTGGCTGC-CGCTTGATTGCTTTCGCCGCCGTC 93255 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 102266 |||||||||||||||||||| |||||| | || | |||||||||||||| |||||| Sbjct 93254 GAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC 93195 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||| ||||| ||||||||||||||| ||||||||||| ||||| Sbjct 93194 ATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGG 93148 >seq74 Length=485481 Score = 100 bits (110), Expect = 4e-16 Identities = 191/272 (70%), Gaps = 11/272 (4%) Strand=Plus/Plus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGA 16113 |||||| | ||||| || ||||||||||||| ||| || ||| || | || | ||| Sbjct 457323 CTTTCCGATAGCATCGATTTCATCAATGAAGATGATACACGGTGTGCTCTTT-CTAGCAT 457381 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | || ||||| ||||| ||| ||| || |||||||| ||||| || || || | || Sbjct 457382 TCTGGAACAGATCACGTACTCGCGAGGCACCAACACCAACGAACATTTCGACGAACTCTG 457441 Query 16174 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231 | | || || || | ||| || ||| ||| ||||| || | || ||||| || Sbjct 457442 AACCACTGA-CACTGAA-GAACGGCACACCAGACTCACCAGCGGTTGCCTTTGCGAGCAG 457499 Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--A 16289 ||||||||| ||||| || ||| | |||| ||||||| |||||||| || || Sbjct 457500 AGTCTTACCAGTACCGGGGGGACCAGAAAGGATAGCACCTCTAGGAATCTTTGCTCCGAG 457559 Query 16290 CTTCCAAAGTATCTCTCAGGTTGCTT-AAGAA 16320 |||| | |||||||||| | ||| ||||| Sbjct 457560 CTTC--TGGAATCTCTCAGGCTCCTTCAAGAA 457589 >seq24 Length=268411 Score = 91.5 bits (100), Expect = 2e-13 Identities = 224/329 (68%), Gaps = 18/329 (5%) Strand=Plus/Minus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 ||||||||||| || || |||| ||| ||| ||||||||||| ||| | || || Sbjct 192648 AGACCCTTGATATGACTTCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCGTAG 192589 Query 176792 CGAAG---CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTG 176848 ||||| || || | ||| || ||||| ||||| || |||| | || |||| Sbjct 192588 CGAAGACCCTTGGTA---TCTGTGTACTCCTTCTTGTGTTGCAGTCCCATAAACTGCTTG 192532 Query 176849 A-GATCGTTGAACTCTTGGTTTGAT-GTGAGCTGTGTGACAGAGGCATCACGAACATTCT 176906 | | || |||| | || || | | | ||| ||| || || || ||||| ||| Sbjct 192531 ATGTTC--TGAATTTCTGCGTTCTTCGAAATCTGATCGACTGATGCGTCGCGAACGTTCA 192474 Query 176907 TACA-CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCC 176965 ||| ||| ||||| ||||||||||||||| | |||| | ||| |||| | || Sbjct 192473 -ACATCTTACCACGCAGAGGGAAGACACCGAACAGATCCTGGTTAACAACAGCTCGTCCA 192415 Query 176966 GCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACAC---TTGCCA 177022 |||| |||||| | || || ||||| ||||||| |||||| |||||| | |||| Sbjct 192414 GCAAGTGCGAGCATAGCAGCCGAGTCACCTTCTGTCAAGATGAGAGTACACCTGTGGCCA 192355 Query 177023 GATTGTGCCGTACCCGCCTTGTTCGCATC 177051 | || ||||| |||||||| || || Sbjct 192354 TCCT-TG--GTACCGGCCTTGTTGGCGTC 192329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741104200240