Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq54 100 3e-16 >seq54 Length=344407 Score = 100 bits (110), Expect = 3e-16 Identities = 178/257 (69%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 154872 ATTATGATTACATACCCATCTA-CACAT--GGTGTATTTGAAACTAACATTAGACAGATA 154928 || ||||| |||||||| || ||| | ||||| |||||| |||| | | || Sbjct 22283 ATCATGATCACATACCC---TAGCACTTTCGGTGTGTTTGAACCTAAGGTCAAGGAGGCC 22227 Query 154929 TGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988 || | | ||||| | |||||||||||||| || | || || || || | || || Sbjct 22226 TGCGATCTTGTTCACAAGAATGGTGGTCAGGTCTACATGGACGGTGCCAACATGAACGCT 22167 Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048 ||| | || || || |||| |||||| ||||| || ||| | ||| | || Sbjct 22166 CAGATTGGTCTTTGCTCTCCTGGTGAAATTGGTGCCGATGTCTGCCATTTGAACCTTCAC 22107 Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108 || || ||||||||||| || || ||||| |||||||| || |||||||| ||||| ||| Sbjct 22106 AAGACCTTCTGTATTCCTCACGGTGGTGGTGGTCCTGGTGTCGGTCCTATTGGTGTCGCA 22047 Query 155109 AAACATCTCACACCATT 155125 | || ||| | || || Sbjct 22046 GAGCACCTCGCTCCTTT 22030 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 153242 AGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCA 153301 |||||| || |||| || || ||||| ||| | ||||||||| ||||||||| || || Sbjct 24012 AGTCATTAAGAGAAATGTCCTCGAGAACCCTGGCTGGTACACAAGTTACACTCCATACCA 23953 Query 153302 AGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGA 153361 | ||||||| ||||||||||||||| | | |||| | ||| || | || | || Sbjct 23952 ACCTGAGATTAGTCAGGGAAGATTGGAGTCCCTGCTCAACTTCCAGACCATGGTCTCTGA 23893 Query 153362 ACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGA 153421 || || || | | || ||||||||||| | | ||||| | || || || ||||| Sbjct 23892 CCTGACCGGCCTGGCCATCTCAAACGCATCTGTCCTCGATGAGCCCACCGCTGCTGCAGA 23833 Query 153422 AGCAATG 153428 || ||| Sbjct 23832 GGCCATG 23826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211590893280