Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq54 100 3e-16
>seq54
Length=344407
Score = 100 bits (110), Expect = 3e-16
Identities = 178/257 (69%), Gaps = 6/257 (2%)
Strand=Plus/Minus
Query 154872 ATTATGATTACATACCCATCTA-CACAT--GGTGTATTTGAAACTAACATTAGACAGATA 154928
|| ||||| |||||||| || ||| | ||||| |||||| |||| | | ||
Sbjct 22283 ATCATGATCACATACCC---TAGCACTTTCGGTGTGTTTGAACCTAAGGTCAAGGAGGCC 22227
Query 154929 TGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988
|| | | ||||| | |||||||||||||| || | || || || || | || ||
Sbjct 22226 TGCGATCTTGTTCACAAGAATGGTGGTCAGGTCTACATGGACGGTGCCAACATGAACGCT 22167
Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACAT 155048
||| | || || || |||| |||||| ||||| || ||| | ||| | ||
Sbjct 22166 CAGATTGGTCTTTGCTCTCCTGGTGAAATTGGTGCCGATGTCTGCCATTTGAACCTTCAC 22107
Query 155049 AAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCA 155108
|| || ||||||||||| || || ||||| |||||||| || |||||||| ||||| |||
Sbjct 22106 AAGACCTTCTGTATTCCTCACGGTGGTGGTGGTCCTGGTGTCGGTCCTATTGGTGTCGCA 22047
Query 155109 AAACATCTCACACCATT 155125
| || ||| | || ||
Sbjct 22046 GAGCACCTCGCTCCTTT 22030
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 153242 AGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCA 153301
|||||| || |||| || || ||||| ||| | ||||||||| ||||||||| || ||
Sbjct 24012 AGTCATTAAGAGAAATGTCCTCGAGAACCCTGGCTGGTACACAAGTTACACTCCATACCA 23953
Query 153302 AGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGA 153361
| ||||||| ||||||||||||||| | | |||| | ||| || | || | ||
Sbjct 23952 ACCTGAGATTAGTCAGGGAAGATTGGAGTCCCTGCTCAACTTCCAGACCATGGTCTCTGA 23893
Query 153362 ACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGA 153421
|| || || | | || ||||||||||| | | ||||| | || || || |||||
Sbjct 23892 CCTGACCGGCCTGGCCATCTCAAACGCATCTGTCCTCGATGAGCCCACCGCTGCTGCAGA 23833
Query 153422 AGCAATG 153428
|| |||
Sbjct 23832 GGCCATG 23826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579211590893280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |