Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq54 122 1e-22 >seq54 Length=344407 Score = 122 bits (134), Expect = 1e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 159611 TTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAG 159670 ||||||| |||||||||||||||| || | || ||||| || | || || ||| | | Sbjct 22219 TTGTTCACAAGAATGGTGGTCAGGTCTACATGGACGGTGCCAACATGAACGCTCAGATTG 22160 Query 159671 GTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACAT 159730 |||| || |||| |||||| ||||| || ||| | ||| | || ||||| | Sbjct 22159 GTCTTTGCTCTCCTGGTGAAATTGGTGCCGATGTCTGCCATTTGAACCTTCACAAGACCT 22100 Query 159731 TCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATC 159790 |||||||||| || || ||||| |||||||| || |||||||||||||| ||| | || | Sbjct 22099 TCTGTATTCCTCACGGTGGTGGTGGTCCTGGTGTCGGTCCTATTGGTGTCGCAGAGCACC 22040 Query 159791 TCACACCATT 159800 || | || || Sbjct 22039 TCGCTCCTTT 22030 Score = 98.7 bits (108), Expect = 1e-15 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 157917 AGTCATACAGCGAAACGTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCA 157976 |||||| || |||| || || ||||| ||| | ||||||||| ||||||||| || || Sbjct 24012 AGTCATTAAGAGAAATGTCCTCGAGAACCCTGGCTGGTACACAAGTTACACTCCATACCA 23953 Query 157977 AGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGA 158036 | ||||||| ||||||||||||||| | | |||| | ||| || | || | || Sbjct 23952 ACCTGAGATTAGTCAGGGAAGATTGGAGTCCCTGCTCAACTTCCAGACCATGGTCTCTGA 23893 Query 158037 ACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGA 158096 || || || || | || ||||||||||| | | ||||| | || || || ||||| Sbjct 23892 CCTGACCGGCCTGGCCATCTCAAACGCATCTGTCCTCGATGAGCCCACCGCTGCTGCAGA 23833 Query 158097 AGCAATG 158103 || ||| Sbjct 23832 GGCCATG 23826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588049972443120