Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq21 91.5 1e-13 seq26 87.8 1e-12 >seq21 Length=270181 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || ||||| ||||| ||||| || || | || | || ||| Sbjct 160989 ACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCC 161048 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | ||| |||||||| || || || || |||||||| | || | ||||||||||| Sbjct 161049 AACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 161108 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | || | || || || | || ||||| ||| Sbjct 161109 ATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTT 161168 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || |||||||| || |||||||||||| Sbjct 161169 CCAGTAAGAGTCTTGACGAAGATCTGCATA 161198 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || || | || |||| || ||||| || || || || Sbjct 161234 TTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAA 161293 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || ||||||||| | || | ||||||||||| |||||| ||||| | Sbjct 161294 GATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGAC--A 161351 Query 34910 TGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | | ||||| || | ||| || || | || ||||| || || ||||| |||| Sbjct 161352 T--TGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCT 161409 Query 34966 TCACAAAGATCTGCATA 34982 | || |||||||||||| Sbjct 161410 TGACGAAGATCTGCATA 161426 >seq26 Length=70271 Score = 87.8 bits (96), Expect = 1e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||||| | || |||| || ||||| |||||||| || Sbjct 12789 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAG 12848 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||| |||||| Sbjct 12849 ATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG 12908 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| || ||| || || | ||| ||||| || ||||| || ||||| || Sbjct 12909 TCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACG 12968 Query 34971 AAG 34973 ||| Sbjct 12969 AAG 12971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632939269176