Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq85 262 7e-65 seq161 232 1e-55 >seq85 Length=501717 Score = 262 bits (290), Expect = 7e-65 Identities = 976/1503 (65%), Gaps = 45/1503 (3%) Strand=Plus/Plus Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGC-GTCAGGGCAGCGT 221429 ||| | |||||| || ||| | || ||| | ||||||| ||| |||| ||||||| Sbjct 350123 GTAGGTCTCGTAAGGGCCGAGCTTCTCAGCCAAGTCGCAAGA-TGCAGTCAAAGCAGCGT 350181 Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCT-TGGCCTCGGGAGAAGTGAAGGGC 221488 | ||||||||||| |||||| ||||||| || | | |||||||| || ||| ||| Sbjct 350182 GATAGATGGTCTCGAAGATCTGGATGTTGAG-CTGTCTAGCCTCGGGTGAGTCGAAAGGC 350240 Query 221489 ATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGT 221548 || || || | ||| | ||||| || || || |||| ||||||||| | ||| Sbjct 350241 ATGCGGAGGGCAAGGAAGGCATCGGCAAGACCACTAACACCGAGACCGATGGGACGGTGG 350300 Query 221549 CTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTG 221608 | ||| | || || || || || || ||||| ||||| | ||||| Sbjct 350301 CGGAAGTTACTCTTGCGAGCCTCAGGGACAGGGTAGTGGTTGATCTCGATGATCTTGTTC 350360 Query 221609 AGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCG 221668 | |||| |||| ||| | ||| |||||| ||||||| | || |||| | |||| Sbjct 350361 AAGTTCTTGGTGACGACCTGAACAACCTCGTGGAGCTTCTTGAAATCGAACTTCTCCTCG 350420 Query 221669 CCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACG 221728 || || || || || | | ||||||| |||| ||| || ||| Sbjct 350421 T-----TCATG-------TCGACGAAGGTGGGAAGGGCAAGAGAAGCCAAGTTGCAGACG 350468 Query 221729 GCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATG 221788 || ||||| || ||| |||| || ||||| || || | |||| || ||| Sbjct 350469 GCAACCTCATCGGGAGCGGTGTACTCGATAATCTCGGTGCACAAGTTGGAGCTGCGAATG 350528 Query 221789 GTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGA 221848 || |||| || || || |||||| ||| ||| |||||||||||||| || || Sbjct 350529 ACACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGG 350588 Query 221849 CCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGT 221907 |||||||| |||||| | || || || |||||| | |||| |||| | || Sbjct 350589 TTACCAGTCTCGGTTTGAGCCTCGAGGATGGCGTACCAGAGCT-TCTGAGCGCGGATGGT 350647 Query 221908 CCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCAC 221966 || ||| | ||||||| || | | | || || | || | | |||| |||| Sbjct 350648 G-TCGCGACCACGACCCTCGCGCTCGTACTTCTCG-TACAAGGCCT--CGAACTCATCAC 350703 Query 221967 CGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGT 222026 |||| | ||| | || || || ||| | ||| ||||||||| ||||| ||| | Sbjct 350704 CGTAGACATCGGCAAGACCAGGGCACTCGCTGGGGCACATCAGAGTCCAGGTGGAGTTTT 350763 Query 222027 CTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCC 222086 | || | || ||||||||| || |||||||| || || | ||||| || | | | Sbjct 350764 GCTCCACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGTAGAAGAGGTCGCGAGCAC 350823 Query 222087 GCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCC 222146 | ||||||| ||||| ||| || | || || | || | || | |||||||||| Sbjct 350824 GAACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAGGAAAGCGAAGACATCAGCGTGCC 350883 Query 222147 ACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCC 222206 | ||||| || |||| ||| | || ||||| ||||||||||||||||| | || ||| Sbjct 350884 AAGGCTCGAGGTAGATGGCGAAGGCACCGGGACGCTTGTTGCCACCCTGGT-CAACAT-A 350941 Query 222207 TCT-CCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGT 222264 ||| ||| | |||||||| || || | || || || ||||| || ||||||||| Sbjct 350942 TCTGGCAGTGTTGTTGAAGACACGGAGCATGGGAACAAGACCGTTCGAGGTACCGTTGGT 351001 Query 222265 GCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCAGACATGCCGATACCACCGG 222323 || ||||| | || ||| | | | | || || | || |||||||| | Sbjct 351002 ACCAGCGATGTAAGAGCCAGTGGCACGAATG-CAGTGAGCGTTGAGACCAATACCACCAG 351060 Query 222324 CGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCT 222383 ||| |||||||||||||||||| ||||||| ||||| ||| || || || || || | Sbjct 351061 CGTTCTTCGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTCAATCGAATCAT 351120 Query 222384 CCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACA 222443 |||| | || | ||| || || || | | ||||| | || | | |||| | |||| Sbjct 351121 CCTTCATGTCGATCAGGAAGCATGAAGCGAGCTGAGGCTGGGGAGTGCCGGCGCTGAACA 351180 Query 222444 GCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTC 222503 | || || |||||| || ||||| ||||||| | ||| || || | | | Sbjct 351181 GAGTAGGCGAGGCGTGGGTGAAGTACTTGAGCGACATCAAGTTGTATGTTTCGATGGCAG 351240 Query 222504 TGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCT 222563 | |||| || ||||| || | || | |||| ||| | |||||| |||| Sbjct 351241 CCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATGATCATCTGCTGGGGTCTCT 351300 Query 222564 CCACAGGACCCTTGGAGCTGGA----GAGCAGGTACGATTTTTCCAGAGTCTTGAACCCA 222619 | || ||| | | || || ||| ||||| || |||| |||||||| || Sbjct 351301 CGGCA--ACC--TTGCCCTCGAGTCTGAGGAGGTATGAACGCTCCAACGTCTTGAAACCG 351356 Query 222620 AAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGC---TCCGACTTG 222676 ||||| | | || || |||||| ||| || | ||| | || ||| || | | | Sbjct 351357 AAGTACTGGTAGTTGAAATCTCTGTCGTAGACAATGGCCGAGTTGAGCTCTTCTGCGTGG 351416 Query 222677 TGCTTTACGCTCAACTCGAAAAAGCGCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCG 222736 | | | ||| | || | | ||| || | | || ||| || | |||| | | Sbjct 351417 TCCATGACGGT---CTTGTATGTCTCCTCGGAGATCATAGGGGCGGCCTTTCTGGTCTTG 351473 Query 222737 GGGTTAACGTTGTGGTACAGCTGCCACATGGCATCAGAGAA-CGTGTCGGGAGTCTGCTT 222795 ||||| | || |||||||| | | | ||| | ||||||| | || | |||||||| Sbjct 351474 GGGTTGATGTAGTGGTACAAATCCGAGATGACGGCAGAGAATTGCTTCTTG-GTCTGCTT 351532 Query 222796 GTGCAGATTCGACACGGCGATCCGAGACGCCAAGATACCATAGTCAGGGTGCACGGTGGT 222855 ||| || |||||||||||||| || | || | | | ||||| ||||| |||||| Sbjct 351533 GTGGAGGTTCGACACGGCGATACGTGCGGCGAGCACGGCGTAGTCGGGGTGGGTGGTGGT 351592 Query 222856 CAT 222858 ||| Sbjct 351593 CAT 351595 >seq161 Length=251022 Score = 232 bits (256), Expect = 1e-55 Identities = 564/856 (66%), Gaps = 22/856 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| || ||| |||||||||||| ||||||||||| Sbjct 93683 ATTTGGAACATGTACAAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATCTC 93624 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 ||||||| | ||| |||| || | ||| ||||| ||| || ||| | Sbjct 93623 TCCAAGGATCTTCACGACTGGAACAGACGTCTCAACGACGACGAGCGATTCTTCATCTCT 93564 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || |||||||| ||||| || |||||||| || |||| | Sbjct 93563 CACGTCCTCGCCTTCTTCGCTGCCTCTGACGGTATCGTCAACGAGAACCTTGTCGAGCGT 93504 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || || ||| | ||||||| ||||||||||||||||| || || Sbjct 93503 TTCAGCTCTGAGGTTCAGATCCCCGAGGCCAGATGTTTCTACGGTTTCCAAATCATGATG 93444 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||| ||| || | ||| | || ||||||| || ||| Sbjct 93443 GAGAACATCCACTCCGAGACCTACTCATTGCTCATCGACACATACATTAGCGA----GCC 93388 Query 25774 GAGAGAGATCGG------CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 | || | || || || |||||||| |||| || |||||||||| ||| Sbjct 93387 CA-AGCAA-CGTACCTACCTCTTCAACGCCATCGACAACATTCCTTGCATCAAGAGAAAG 93330 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || |||||| | ||||||||| | | || | | || |||||| || || | Sbjct 93329 GCCGACTGGGCCCTCAAGTGGATCTGCGACAAGGACTCGACATTTGGCTGCCGCTTGATT 93270 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 || || || || || ||||| ||||| ||| || || || || |||||||||||||| Sbjct 93269 GCTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGCTC 93210 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||||||| || ||| ||||||||||||||| | || ||| Sbjct 93209 AAGAAGCGTGGTCTCATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAG 93150 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067 ||| | |||| || || |||||||| ||| || | ||| | |||| || ||| Sbjct 93149 GGTATGCACACCGACTTCGCCTGCCTCCTCCACTC---TCACCTCAAGAACAAGCCCTCT 93093 Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127 | |||| | ||||||| |||||||| | |||||| | ||||| Sbjct 93092 GCTGCTCTCGTCCGCGAGATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCA 93033 Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187 | ||||||||| || |||||| | |||||||| ||| Sbjct 93032 GATGCTCTTCCCTGTGCTCTTCTCGGCATGAACGCCAAGCTCATGTGTCAATACATCGAG 92973 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCC--AGACTCTACAGTACGCCTA 26245 | ||| || |||| ||||| | || || | ||| ||| ||||| | | | Sbjct 92972 TTTGTCGCTGACCGCCTGCTCCTCGCTCTCGG-CGAGCCCAAGA-TCTACCAAGCCACCA 92915 Query 26246 ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGA 26305 |||| |||||||| ||||| ||||| ||||||| || |||||||||||||| || |||| Sbjct 92914 ACCCCTTCGACTTCATGGAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAGAAGA 92855 Query 26306 GGGTCGGCGACTATCA 26321 | || || ||||| || Sbjct 92854 GAGTTGGTGACTACCA 92839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842861036480