Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq161 152 8e-31
seq80 132 8e-25
seq27 122 1e-21
seq85 118 2e-20
seq105 109 9e-18
>seq161
Length=251022
Score = 152 bits (168), Expect = 8e-31
Identities = 237/331 (72%), Gaps = 11/331 (3%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| || || ||| ||| | |||||| ||| || ||||||||||| || |||||
Sbjct 93147 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTT 93206
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AA 794458
||||||||| ||||||| | ||| ||| ||||| ||||| |||||||||||||| ||
Sbjct 93207 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAA 93266
Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518
||| | ||| || | |||| |||| | | ||| | | ||||||||| | ||||
Sbjct 93267 AGCAATCAAGCGGC-AGCCAAA--TGTCGA-GTCCTTGTCGCAGATCCACTTGAGGGCCC 93322
Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCC--T 794575
| || |||||| || | | | || | ||||||||||| ||||||| ||| | |
Sbjct 93323 AGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGCGTTGAAGAGGTAGGTACGTT 93382
Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635
|| | || || | | ||| ||||||||||| | ||||||||||| ||||||||||
Sbjct 93383 GCTTG---GGCTCGCTAATGTATGTGTCGATGAGCAATGAGTAGGTCTCGGAGTGGATGT 93439
Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || || ||| ||||| || || || ||
Sbjct 93440 TCTCCATCATGATTTGGAAACCGTAGAAACA 93470
Score = 131 bits (144), Expect = 3e-24
Identities = 230/330 (70%), Gaps = 10/330 (3%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || | | |||||| |||||||||||||| | |
Sbjct 92825 TGACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 92884
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTT---CTCGCACC 794007
|||||| |||||| | ||| ||||||| | ||||| ||| ||||| |
Sbjct 92885 ACGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGCTCGC-CG 92943
Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067
|||||| | ||||||||||| ||||| || || ||||| || |||||||| |||||
Sbjct 92944 AGAGCGAGG--AGCAGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGT 93001
Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA--AACTCTTTCTCGATCTCGAC 794125
||||||||| || || ||| || | | |||||| ||||||| |||||| ||||
Sbjct 93002 TCATGCCGAGAAGAGCACAGGGAAGAGCAT--CTGACAAGAACTCTTGCTCGATAGCGAC 93059
Query 794126 GGCCTCGATGATGATCTGCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTA 794185
|||||| ||||||||| | | | | | || ||||||| ||| | ||
Sbjct 93060 AGCCTCGGTGATGATCTCGCGGACGAGAGCAGCAGAGGGCTTGTTCTTGAGGTGAGAGTG 93119
Query 794186 GAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215
||| |||||||| |||||| |||| |||
Sbjct 93120 GAGGAGGCAGGCGAAGTCGGTGTGCATACC 93149
>seq80
Length=674305
Score = 132 bits (146), Expect = 8e-25
Identities = 109/133 (82%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688
||||| ||| | |||||||| ||||||||| | ||||||||| | || ||||| | ||
Sbjct 176324 CTCTTCGAGATCATCCTCGCTGCCAACTACATGGACATCAAGGCTCTTCTCGACGTCGGC 176265
Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748
||||||||||| || ||| | ||||||||||||||||| ||||| || || ||||||||
Sbjct 176264 TGCAAGACCGTCGCAAACATGATCAAGGGCAAGTCGCCTGAGGAGATTCGTAAGACCTTC 176205
Query 2035749 AACATCAAGTACG 2035761
|||||| || |||
Sbjct 176204 AACATCCAGAACG 176192
>seq27
Length=522443
Score = 122 bits (134), Expect = 1e-21
Identities = 276/413 (67%), Gaps = 4/413 (1%)
Strand=Plus/Plus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062
|| ||||||||||| || || | | ||||| ||| || | || ||||| ||
Sbjct 297483 GATGGCAACATGCCTCACGTCATCATCTCGGGCATGCCTGGTATCGGAAAGACAACCTCG 297542
Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122
||| ||| |||||| | | | || | ||| | | || ||||| || |||||
Sbjct 297543 ATCCTGTGTCTGGCGAGACAATTGCTTGGAGATGCCTACAAGGAAGCCGTCCTTGAACTG 297602
Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC--ATCAAGCATCACGCTT 2019180
|| || ||||||||||| || | |||||||| || |||| |||||| ||||
Sbjct 297603 AACGCCTCAGACGAGCGTGGTATCGACGTCGTCCG--CAATCGTATCAAGGGCTTCGCTC 297660
Query 2019181 CGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240
||||| | || || || |||||||||| ||| || | || |||||||| ||||||
Sbjct 297661 AGAAAAAAGTCACACTACCCGCCGGCCGCCAAAAGCTGGTTATTCTCGATGAAGCCGACA 297720
Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300
|| | || || | |||||||| ||| | || |||||||||| ||| ||| ||| |
Sbjct 297721 GCATGACATCCGGCGCCCAGCAAGCCTTGAGAAGAACCATGGAAATCTACTCCAGCACAA 297780
Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360
| || || || | || ||||| ||| | | |||| || | || || ||||
Sbjct 297781 CTCGCTTCGCCTTCGCTTGCAATCAGTCCAACAAGATCATTGAGCCTCTACAATCTCGTT 297840
Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTG 2019413
| ||||| | | | | ||||| |||||||| ||||| | | |||||||
Sbjct 297841 GTGCCATTCTCAGATACTCACGCCTGACCGACGCACAGATTGTCAAGCGTCTG 297893
>seq85
Length=501717
Score = 118 bits (130), Expect = 2e-20
Identities = 182/260 (70%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| ||||| | || |||| ||| ||||| ||||||||||| ||||| ||||| ||
Sbjct 350930 CTGGTCAACATATCTGGCAGTGTTGTTGAAGACACGGAGCATGGGAACAAGACCGTTCGA 350989
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||||| || || | ||| | ||| | ||| || | ||| ||| | ||
Sbjct 350990 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGAATGCAGTGAGCGTTGAGACC 351049
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || || ||| ||||| | ||||| | || || || |||||||| || ||
Sbjct 351050 AATACCACCAGCGTTCTTCGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 351109
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||||| || |||||||||| | ||| ||||| || | | || || | | |||||
Sbjct 351110 AATCGAATCATCCTTCATGTCGATCAGGAAGCATGAAGCGAGCTGAGGCTGGGGAGTGCC 351169
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
||| |||| || || ||||
Sbjct 351170 GGCGCTGAACAGAGTAGGCG 351189
Score = 93.3 bits (102), Expect = 7e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936
|||| ||| |||| ||||| ||||| || || ||||||||||||||||||||| |
Sbjct 350794 TCCAGAGGGCGTAGAAGAGGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 350853
Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996
||||||| | ||| || || |||||||| ||||| |||||| ||| ||||| ||
Sbjct 350854 GGTCGAGGAAAGCGAAGACATCAGCGTGCCAAGGCTCGAGGTAGATGGCGAAGGCACCGG 350913
Query 2071997 TGCGCTTGCCGCCGCC 2072012
|||||| ||| ||
Sbjct 350914 GACGCTTGTTGCCACC 350929
>seq105
Length=622586
Score = 109 bits (120), Expect = 9e-18
Identities = 78/90 (87%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| |||||||||||||||||| |||| || || ||| | |
Sbjct 297272 GTACTTGGTGACGGCCTTGGTGCCCTCTGAGACGGCGTGCTTGGCGAGCTCACCGGGGAG 297213
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560
||| ||||| || | |||||||||||||||
Sbjct 297212 GATAAGGCGGACTGAGGTCTGGATCTCGCG 297183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916228635448313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |