Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq161 152 8e-31 seq80 132 8e-25 seq27 122 1e-21 seq85 118 2e-20 seq105 109 9e-18 >seq161 Length=251022 Score = 152 bits (168), Expect = 8e-31 Identities = 237/331 (72%), Gaps = 11/331 (3%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| || || ||| ||| | |||||| ||| || ||||||||||| || ||||| Sbjct 93147 ACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACCACGCTT 93206 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC-AA 794458 ||||||||| ||||||| | ||| ||| ||||| ||||| |||||||||||||| || Sbjct 93207 CTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAGATACCCTCGACGGCGGCGAA 93266 Query 794459 AGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 ||| | ||| || | |||| |||| | | ||| | | ||||||||| | |||| Sbjct 93267 AGCAATCAAGCGGC-AGCCAAA--TGTCGA-GTCCTTGTCGCAGATCCACTTGAGGGCCC 93322 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGT-GGTCC--T 794575 | || |||||| || | | | || | ||||||||||| ||||||| ||| | | Sbjct 93323 AGTCGGCCTTTCTCTTGATGCAAGGAATGTTGTCGATGGCGTTGAAGAGGTAGGTACGTT 93382 Query 794576 TCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGT 794635 || | || || | | ||| ||||||||||| | ||||||||||| |||||||||| Sbjct 93383 GCTTG---GGCTCGCTAATGTATGTGTCGATGAGCAATGAGTAGGTCTCGGAGTGGATGT 93439 Query 794636 TTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || || ||| ||||| || || || || Sbjct 93440 TCTCCATCATGATTTGGAAACCGTAGAAACA 93470 Score = 131 bits (144), Expect = 3e-24 Identities = 230/330 (70%), Gaps = 10/330 (3%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || | | |||||| |||||||||||||| | | Sbjct 92825 TGACACCAGCCTTCTGGTAGTCACCAACTCTCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 92884 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTT---CTCGCACC 794007 |||||| |||||| | ||| ||||||| | ||||| ||| ||||| | Sbjct 92885 ACGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCTTGGTAGATCTTGGGCTCGC-CG 92943 Query 794008 CGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGT 794067 |||||| | ||||||||||| ||||| || || ||||| || |||||||| ||||| Sbjct 92944 AGAGCGAGG--AGCAGGCGGTCAGCGACAAACTCGATGTATTGACACATGAGCTTGGCGT 93001 Query 794068 TCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA--AACTCTTTCTCGATCTCGAC 794125 ||||||||| || || ||| || | | |||||| ||||||| |||||| |||| Sbjct 93002 TCATGCCGAGAAGAGCACAGGGAAGAGCAT--CTGACAAGAACTCTTGCTCGATAGCGAC 93059 Query 794126 GGCCTCGATGATGATCTGCCTGGGCACGTCGGACGACGGCTTGTCGACGAGCATCGTGTA 794185 |||||| ||||||||| | | | | | || ||||||| ||| | || Sbjct 93060 AGCCTCGGTGATGATCTCGCGGACGAGAGCAGCAGAGGGCTTGTTCTTGAGGTGAGAGTG 93119 Query 794186 GAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215 ||| |||||||| |||||| |||| ||| Sbjct 93120 GAGGAGGCAGGCGAAGTCGGTGTGCATACC 93149 >seq80 Length=674305 Score = 132 bits (146), Expect = 8e-25 Identities = 109/133 (82%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 ||||| ||| | |||||||| ||||||||| | ||||||||| | || ||||| | || Sbjct 176324 CTCTTCGAGATCATCCTCGCTGCCAACTACATGGACATCAAGGCTCTTCTCGACGTCGGC 176265 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 ||||||||||| || ||| | ||||||||||||||||| ||||| || || |||||||| Sbjct 176264 TGCAAGACCGTCGCAAACATGATCAAGGGCAAGTCGCCTGAGGAGATTCGTAAGACCTTC 176205 Query 2035749 AACATCAAGTACG 2035761 |||||| || ||| Sbjct 176204 AACATCCAGAACG 176192 >seq27 Length=522443 Score = 122 bits (134), Expect = 1e-21 Identities = 276/413 (67%), Gaps = 4/413 (1%) Strand=Plus/Plus Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062 || ||||||||||| || || | | ||||| ||| || | || ||||| || Sbjct 297483 GATGGCAACATGCCTCACGTCATCATCTCGGGCATGCCTGGTATCGGAAAGACAACCTCG 297542 Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122 ||| ||| |||||| | | | || | ||| | | || ||||| || ||||| Sbjct 297543 ATCCTGTGTCTGGCGAGACAATTGCTTGGAGATGCCTACAAGGAAGCCGTCCTTGAACTG 297602 Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATC--ATCAAGCATCACGCTT 2019180 || || ||||||||||| || | |||||||| || |||| |||||| |||| Sbjct 297603 AACGCCTCAGACGAGCGTGGTATCGACGTCGTCCG--CAATCGTATCAAGGGCTTCGCTC 297660 Query 2019181 CGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240 ||||| | || || || |||||||||| ||| || | || |||||||| |||||| Sbjct 297661 AGAAAAAAGTCACACTACCCGCCGGCCGCCAAAAGCTGGTTATTCTCGATGAAGCCGACA 297720 Query 2019241 GCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGA 2019300 || | || || | |||||||| ||| | || |||||||||| ||| ||| ||| | Sbjct 297721 GCATGACATCCGGCGCCCAGCAAGCCTTGAGAAGAACCATGGAAATCTACTCCAGCACAA 297780 Query 2019301 CGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTT 2019360 | || || || | || ||||| ||| | | |||| || | || || |||| Sbjct 297781 CTCGCTTCGCCTTCGCTTGCAATCAGTCCAACAAGATCATTGAGCCTCTACAATCTCGTT 297840 Query 2019361 GCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTG 2019413 | ||||| | | | | ||||| |||||||| ||||| | | ||||||| Sbjct 297841 GTGCCATTCTCAGATACTCACGCCTGACCGACGCACAGATTGTCAAGCGTCTG 297893 >seq85 Length=501717 Score = 118 bits (130), Expect = 2e-20 Identities = 182/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| ||||| | || |||| ||| ||||| ||||||||||| ||||| ||||| || Sbjct 350930 CTGGTCAACATATCTGGCAGTGTTGTTGAAGACACGGAGCATGGGAACAAGACCGTTCGA 350989 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||||| || || | ||| | ||| | ||| || | ||| ||| | || Sbjct 350990 GGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGAATGCAGTGAGCGTTGAGACC 351049 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || || ||| ||||| | ||||| | || || || |||||||| || || Sbjct 351050 AATACCACCAGCGTTCTTCGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCGTC 351109 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||||| || |||||||||| | ||| ||||| || | | || || | | ||||| Sbjct 351110 AATCGAATCATCCTTCATGTCGATCAGGAAGCATGAAGCGAGCTGAGGCTGGGGAGTGCC 351169 Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799 ||| |||| || || |||| Sbjct 351170 GGCGCTGAACAGAGTAGGCG 351189 Score = 93.3 bits (102), Expect = 7e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| |||| ||||| ||||| || || ||||||||||||||||||||| | Sbjct 350794 TCCAGAGGGCGTAGAAGAGGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 350853 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 ||||||| | ||| || || |||||||| ||||| |||||| ||| ||||| || Sbjct 350854 GGTCGAGGAAAGCGAAGACATCAGCGTGCCAAGGCTCGAGGTAGATGGCGAAGGCACCGG 350913 Query 2071997 TGCGCTTGCCGCCGCC 2072012 |||||| ||| || Sbjct 350914 GACGCTTGTTGCCACC 350929 >seq105 Length=622586 Score = 109 bits (120), Expect = 9e-18 Identities = 78/90 (87%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| |||||||||||||||||| |||| || || ||| | | Sbjct 297272 GTACTTGGTGACGGCCTTGGTGCCCTCTGAGACGGCGTGCTTGGCGAGCTCACCGGGGAG 297213 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| ||||| || | ||||||||||||||| Sbjct 297212 GATAAGGCGGACTGAGGTCTGGATCTCGCG 297183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916228635448313