Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq26 134 9e-27
seq21 122 6e-23
seq24 104 2e-17
>seq26
Length=70271
Score = 134 bits (148), Expect = 9e-27
Identities = 152/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| || ||||||||| ||||| ||||| || || |||| ||||
Sbjct 12768 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 12827
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || |||||||||||||||||||| || || ||||| | || | |||||||||||
Sbjct 12828 TCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 12887
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| || |||||| |||| ||| ||||||
Sbjct 12888 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 12947
Query 34946 TTTCCCGTGAGGGTCTTTACAAAG 34969
|| ||||| |||||||| || |||
Sbjct 12948 TTGCCCGTAAGGGTCTTGACGAAG 12971
>seq21
Length=270181
Score = 122 bits (134), Expect = 6e-23
Identities = 158/216 (73%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | ||| |||||||| ||||| ||||| || || | || ||||
Sbjct 161214 AGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATCC 161273
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || ||||||||| | || | |||||||||||
Sbjct 161274 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 161333
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || ||||| || | ||||| || | |||||| |||| || ||
Sbjct 161334 TGGATCTTCGACTTGAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGAT 161389
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || ||||||||||| || |||||||||||
Sbjct 161390 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || |||| ||| | ||| ||||||||| ||||| ||||| || || | || |
Sbjct 160983 CTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCG 161042
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||| |||||||||||||||||||| || |||||||| | || | |||||||||
Sbjct 161043 TCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 161102
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || |||||| | || | || | || || || | || |||
Sbjct 161103 TCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATGTGATG 161162
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||||| || || ||||| || |||||||||||
Sbjct 161163 GTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197
>seq24
Length=268411
Score = 104 bits (114), Expect = 2e-17
Identities = 98/124 (79%), Gaps = 1/124 (1%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| |||||||||||||| ||||| ||||| || ||| | || ||||
Sbjct 107854 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCC 107913
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC- 34884
|| || ||||| || ||||||||||| || || ||||| | || | |||||||||||
Sbjct 107914 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCT 107973
Query 34885 GTTT 34888
||||
Sbjct 107974 GTTT 107977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692137113373
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |