Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq161 221 2e-51 >seq161 Length=251022 Score = 221 bits (244), Expect = 2e-51 Identities = 367/517 (71%), Gaps = 30/517 (6%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || |||||||| ||||| || ||||||||||||||| | || | Sbjct 93684 GATTTGGAACATGTAC-AAGAAGGCCGAAGCCTCTTTCTGGACCGCCGAGGAGATTGATC 93626 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGT--GTCG-CTGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| | || || | |||||||||||| ||| Sbjct 93625 TCTCCAAGGATCTTCACG----ACTGGAACAGACGTCTCAACGACGACGAGCGATTCTTC 93570 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||||||||| || ||| ||| || || ||||| ||||||||| | Sbjct 93569 ATCTCTCACGTCCTCGCCTTCTT-CGCTGCCTCTGACGGTATCGTCAACGAGAACCTTGT 93511 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | ||||| || | || ||||| | | || ||||| ||||| || Sbjct 93510 CGAGCGTTTCAGCTCTGAGGTTCAGATCCCCGAGGCCAGATGTTTCTACGGTTTCCAAAT 93451 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| | || |||||||| ||| | | || Sbjct 93450 CATGATGGAGAACATCCACTCCGAGACCTACTCATTGCTCATCGACACATACATTAGCGA 93391 Query 1456068 CCCGGTCGAGAA--GGACC-ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAA 1456124 || | || | | ||| ||||||| ||||||||||| | || | | | || Sbjct 93390 GCC---CAAGCAACGTACCTACCTCTTCAACGCCATCGACAACATTCCTTGCATCAAGAG 93334 Query 1456125 AAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCGAG 1456181 ||||||||||||||| | ||||||||| ||||||| ||||||| || || | Sbjct 93333 AAAGGCCGACTGGGCCCTCAAGTGGATCTGCGACAAGGA----CTCGACATTTGGCTG-- 93280 Query 1456182 CGGCTCGTCGGCTTT-GCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 | ||| | ||||| ||||| |||||||| ||||| ||||| ||| ||| |||| Sbjct 93279 CCGCTTGATTGCTTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCAT 93220 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 ||| |||||||||||||| || ||||||||||||||| Sbjct 93219 CTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTT 93183 Score = 120 bits (132), Expect = 4e-21 Identities = 165/223 (74%), Gaps = 7/223 (3%) Strand=Plus/Minus Query 1456521 AGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTT--TGTCAGCGAGTCGCTGCCGGT 1456578 |||||||| |||||| |||| |||||| ||||||| |||||| || | || || Sbjct 93076 AGATCATCACCGAGGCTGTCGCTATCGAGCAAGAGTTCTTGTCAGATGCTCT-TCCCTGT 93018 Query 1456579 GGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGAC 1456638 | | || ||||||||||||||| ||||||||| || ||||| || ||| ||||| ||| Sbjct 93017 G-CTCTTCTCGGCATGAACGCCAA-GCTCATGTGTCAATACATCGAGTTT-GTCGCTGAC 92961 Query 1456639 CGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATG 1456698 ||||||||| || |||||| | | ||| ||||| | ||||||| ||| | Sbjct 92960 CGCCTGCTCCTCGCTCTCGGC-GAGCCCAAGATCTACCAAGCCACCAACCCCTTCGACTT 92902 Query 1456699 GATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 |||||| |||||| | | |||||||||||||| |||||| Sbjct 92901 CATGGAGAACATCTCGTTGGCTGGCAAGACCAACTTCTTCGAG 92859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177795092543054