Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq85 181 1e-40 seq161 86.0 8e-12 seq24 86.0 8e-12 >seq85 Length=501717 Score = 181 bits (200), Expect = 1e-40 Identities = 567/868 (65%), Gaps = 25/868 (3%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 |||||||| | || ||||| ||||| || || |||||| | | |||||||| | | Sbjct 350439 GGAAGGGCAAGAGAAGCCAAGTTGCAGACGGCAACCTCATCGGGAGCGGTGTACTCGATA 350498 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAA-TTCTTTTGGTTACTCTTCTT 111348 || || || || |||||||| || ||| | | |||| ||||| ||||| ||||| Sbjct 350499 ATCTCGGTGCACAAGTTGGAGCTGCGAAT-GACACCAAGGTTCTTCTGGTTGCTCTTGCG 350557 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 |||||| |||||||||||||||||| | || | || ||||| || || | | ||| || Sbjct 350558 GTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTTTGAGCCTCGAGGAT 350617 Query 111409 AGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGT 111464 || | ||| | | || | | || |||| || | | || ||||| ||||| Sbjct 350618 GGCGTACCAGAGCTTCTGAGCGCGG----ATGGTGTCGCGACCACGACCCTCGCGCTCGT 350673 Query 111465 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 111524 |||| ||| | ||| || ||||| ||||| | |||| ||||| || || | Sbjct 350674 ACTTCTCGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCAAGACCAGGGCACTCGC 350733 Query 111525 CTGGACAGAAAAGAGACCA--TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582 || || | |||| ||| | || || ||| || ||||||||||| || || || Sbjct 350734 TGGGGCACATCAGAGTCCAGGTGGA--GTTTTGCTCCACACGCTTCATGAAGAGATCGGG 350791 Query 111583 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 111642 ||||| |||| | ||||| || | | ||| |||| || | || ||||| || Sbjct 350792 GATCCAGAGGGCGTAGAAGAGGTCGCGAGCACGAACCTCCTCCTTGCCGTGGTTCTTGCG 350851 Query 111643 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 111702 | || ||||| | | || ||| |||||||| ||||| || |||| |||| | || Sbjct 350852 GAGGTCGAGGAAAGCGAAGACATCAGCGTGCCAAGGCTCGAGGTAGATGGCGAAGGCACC 350911 Query 111703 CTTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 111756 ||||| ||| | || | ||||| | || ||| ||| || || || || Sbjct 350912 ---GGGACGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAGACACGGAG 350968 Query 111757 CATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCT 111816 ||| |||| || ||| | || ||| || || || || ||| | |||| | Sbjct 350969 CATGGGAACAAGACCGTTCGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACG 351028 Query 111817 CACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGT 111876 | || || | |||||||| ||||| ||| ||||| || || | | Sbjct 351029 AATGCAGTGAGCGTTGAGACCAATACCACCAGCGTTCTTCGAGATCATGGCGCAGGTCTT 351088 Query 111877 AAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGA 111936 || || | |||||||||| || || || ||||| || |||| |||||||| | Sbjct 351089 GAGGGTGTCGTAGATACCGTCAATCGAATCATCCTTCATGTCGATCAGGAAGCATGAAGC 351148 Query 111937 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 111996 | ||| || || || || || |||| || || || | ||||| |||| ||| Sbjct 351149 GAGCTGAGGCTGGGGAGTGCCGGCGCTGAACAGAGTAGGCGAGGCGTGGGTGAA-GTACT 351207 Query 111997 T-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGA 112055 | | |||||| || |||||| || | | ||| |||||||| || ||||||||||||| Sbjct 351208 TGAGCGACATCAAGTTGTATGTTTCGATGGCAGCCTCAATGTCCTCGCCGTGGATGCCGA 351267 Query 112056 TTGCGACCCGCATGAACATGTACTGTGG 112083 || || ||||||| ||| | ||| || Sbjct 351268 CAGCAACACGCATGATCATCTGCTGGGG 351295 >seq161 Length=251022 Score = 86.0 bits (94), Expect = 8e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| | ||||||||| || || || || || || |||||| ||||| ||||||||||| Sbjct 93141 GTGCATACCCTCATCACGAGAGATGAGCTCGTTGGAGAAGGTAAGACCGGGCATGAGACC 93200 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCAC 122786 |||||||| | ||| | || | ||| || || ||||||||||||||||| || Sbjct 93201 ACGCTTCTTGAGCCAGAAGATGGAAGCGAAGGAGCCAGAGAAGAAGATACCCTCGAC 93257 >seq24 Length=268411 Score = 86.0 bits (94), Expect = 8e-12 Identities = 220/326 (67%), Gaps = 12/326 (4%) Strand=Plus/Minus Query 182517 AGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAG 182576 ||||||||||| ||| ||||| | ||| ||| ||||| ||||| ||| | || ||| Sbjct 192648 AGACCCTTGATATGACTTCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCGTAG 192589 Query 182577 CGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAAGACCAAGGATCTTCTTGA-G 182635 ||||| | |||| ||| || || ||||| || || | | || ||||| | Sbjct 192588 CGAAGACCCTTGGTATCTGTGTACTCCTTCTTGTGTTGCAGTCCCATAAACTGCTTGATG 192529 Query 182636 ATCATTGAACTCCTG-GTTTGATGTAAGCTGTGCCACCGAAGCGTCCCGAACATTCTTAC 182694 || |||| | ||| ||| | || ||| | || || ||||| ||||| ||| || Sbjct 192528 TTC--TGAATTTCTGCGTTCTTCGAAATCTGATCGACTGATGCGTCGCGAACGTTC-AAC 192472 Query 182695 AT-TTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCAACGACAGAGAGACCCGCA 182753 || ||||| || || ||||| |||||| | |||| | ||| |||| | || ||| Sbjct 192471 ATCTTACCACGCAGAGGGAAGACACCGAACAGATCCTGGTTAACAACAGCTCGTCCAGCA 192412 Query 182754 ACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAGAGTACAC---TTTCCAGAT 182810 | ||||| | ||||| ||||| || || | |||||||||||| | ||| Sbjct 192411 AGTGCGAGCATAGCAGCCGAGTCACCTTCTGTCAAGATGAGAGTACACCTGTGGCCATCC 192352 Query 182811 TGTGCCGTACCCGCCTTGTTCGCGTC 182836 | || ||||| |||||||| ||||| Sbjct 192351 T-TG--GTACCGGCCTTGTTGGCGTC 192329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030688983200