Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq85 223 4e-53 seq161 127 2e-24 seq74 100 3e-16 seq24 84.2 3e-11 >seq85 Length=501717 Score = 223 bits (246), Expect = 4e-53 Identities = 904/1399 (65%), Gaps = 43/1399 (3%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||| ||||||| || || |||| || || || || |||||||| ||| | Sbjct 351295 CCCCAGCAGATGATCATGCGTGTTGCTGTCGGCATCCACGGCGAGGACATTGAGGCTGCC 351236 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || |||||| || |||||| | | ||| |||| ||||| | || || || || Sbjct 351235 ATCGAAACATACAACTTGATGTCGCTCAAGTAC-TTCACCCACGCCTCGCCTACTCTGTT 351177 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 || || || || || || || | | |||||||| |||| || ||||| || Sbjct 351176 CAGCGCCGGCACTCCCCAGCCTCAGCTCGCTTCATGCTTCCTGATCGACATGAAGGATGA 351117 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 || || |||||||||| | || || | | || || ||||| ||| ||||| Sbjct 351116 TTCGATTGACGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCGAAGAACGCTGG 351057 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | || || | | |||| | ||| || || || || Sbjct 351056 TGGTATTGGTCTCAACGCTCACTGCATTCGTGCCACTGGCTCTTACATCGCTGGTACCAA 350997 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || | ||| || |||| ||||| || || || ||| ||| || | ||||| Sbjct 350996 CGGTACCTCGAACGGTCTTGTTCCCATGCTCCGTGTCTTCAACAACACTGCCAGATATGT 350937 Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 | || | ||| ||||| || | |||| |||| || ||||| ||||| Sbjct 350936 TGACCAGGGTGGCAACAAGCGTCCC---GGTGCCTTCGCCATCTACCTCGAGCCTTGGCA 350880 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 ||| ||| || | | ||||| || | || ||||| || | ||||||| || || Sbjct 350879 CGCTGATGTCTTCGCTTTCCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTTCG-TG 350821 Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | ||||| ||||||| ||| |||||||| || ||||||||||||||| | || ||| | | Sbjct 350820 CTCGCGACCTCTTCTACGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTGGAGCAAA 350761 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 || ||| |||| | || || | || |||||||| |||||| | |||| Sbjct 350760 ACTCCACCTGGACTCTGATGTGCCCCAGCGAGTGCCCTGGTCTTGCCGATGTCTACGGTG 350701 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG--ACGGT 104871 | ||||| || ||| | ||| ||||||||| || ||||| | | | ||| || | Sbjct 350700 ATGAGTTCGAGGCCTTGTACGAGAAGTACGAGCGCGAGGGTCGTG-GTC-GCGACACCAT 350643 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | ||| | || | | ||| | || || ||| || |||||||||||||||||| || | Sbjct 350642 CCGCGCT-CAGAAGCTCTGGTACGCCATCCTCGAGGCTCAAACCGAGACTGGTAACCCTT 350584 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || || || |||| ||||| || || ||||| | ||||| || Sbjct 350583 TCATGCTCTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTGTCATTC 350524 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 105050 || ||||| | || || || || | || | || | |||||| || || | Sbjct 350523 GCAGCTCCAACTTGTGCACCGAGATTATCGAGTACACCGCTCCCGATGAGGTTGCCGTCT 350464 Query 105051 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAA--AGACATTTGA 105108 | ||| | || || | || || |||| | || || || || | ||| || || Sbjct 350463 GCAACTTGGCTTCTCTTGCCCTTCCCACCTTCGTCGA--CATGAACGAGGAGAAGTTCGA 350406 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 || | || |||||||| ||| | |||||||| ||| | |||| | || || Sbjct 350405 TTTCAAGAAGCTCCACGAGGTTGTTCAGGTCGTCACCAAGAACTTGAACAAGATCATCGA 350346 Query 105169 TAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225 | || ||||| || |||| ||||| || ||| | | |||||||| || Sbjct 350345 GATCAACCACTACCCTGTCCCTGAG---GCTCGCAAGAGTAACTTCCGCCACCGTCCCAT 350289 Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTG---TCGCCACGCATTT-G 105281 |||||||||||| ||||| || |||| | ||| ||| || || || ||| | Sbjct 350288 CGGTCTCGGTGTTAGTGGTCTTGCCGATG----CCTTCCTTGCCCTCCGCATGCCTTTCG 350233 Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341 | || ||| || | | |||| | || || |||||||| |||||||| ||| Sbjct 350232 ACTCACCCGAGGCTAGACAGCTCAACATCCAGATCTTCGAGACCATCTATCACGCTGCT- 350174 Query 105342 TTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 105400 |||| || || || ||||| ||| || || || || |||| || || Sbjct 350173 TTGACTGCATCTTGCGACTTGGCTGAGAAGCTCGGCCCTTACGAGACCTACCCTGGCTCC 350114 Query 105401 CCAGCTTCACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACT 105458 || | || |||||| | ||| || | |||||||||| || | || | || || Sbjct 350113 CCCGTGTC-CAAGGGCGAGCTCCAGTACGATATGTGGG-GCGTCACTCCCTCCGATCTCT 350056 Query 105459 ACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCA 105518 |||||||| ||||| ||||| ||| || | ||| |||| ||| || ||| Sbjct 350055 GGGACTGGGAGGCTCTGAAGGAGAAGATCGCCAAGGATGGTGTTCGCAACTCGCTACTCG 349996 Query 105519 TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 105578 | || || ||||| || ||| ||| | || ||| |||| || |||||||| || | Sbjct 349995 TTGCCCCCATGCCCACTGCCAGTACCTCGCAGATCATGGGCTTCAACGAATGCTTCGAGC 349936 Query 105579 CCTACACGACGAACATCTA 105597 ||||||| | |||||||| Sbjct 349935 CCTACACCTCTAACATCTA 349917 >seq161 Length=251022 Score = 127 bits (140), Expect = 2e-24 Identities = 169/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCA-AACAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGA 94771 ||||| | |||||| | |||| |||| || || ||| |||||| | || ||||| | | Sbjct 93371 CTCTTCAACGCCATCGACAACA-TTCCTTGCAT-CAAGAGAAAGGCCGACTGGGCCCTCA 93314 Query 94772 AGTGGTT-TGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||||| | || |||| | | || || |||| || | | || || || || Sbjct 93313 AGTGGATCTGCGACAAGGACTCGACATTTGGCTGC-CGCTTGATTGCTTTCGCCGCCGTC 93255 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 |||||||||||||||||||| |||||| | || | |||||||||||||| |||||| Sbjct 93254 GAGGGTATCTTCTTCTCTGGCTCCTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTC 93195 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||| ||||| ||||||||||||||| ||||||||||| ||||| Sbjct 93194 ATGCCCGGTCTTACCTTCTCCAACGAGCTCATCTCTCGTGATGAGGG 93148 >seq74 Length=485481 Score = 100 bits (110), Expect = 3e-16 Identities = 191/272 (70%), Gaps = 11/272 (4%) Strand=Plus/Plus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT-TGATTTTCGCGAGCGA 9752 |||||| | ||||| || ||||||||||||| ||| || ||| || | || | ||| Sbjct 457323 CTTTCCGATAGCATCGATTTCATCAATGAAGATGATACACGGTGTGCTCTTT-CTAGCAT 457381 Query 9753 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9812 | || ||||| ||||| ||| ||| || |||||||| ||||| || || || | || Sbjct 457382 TCTGGAACAGATCACGTACTCGCGAGGCACCAACACCAACGAACATTTCGACGAACTCTG 457441 Query 9813 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9870 | | || || || | ||| || ||| ||| ||||| || | || ||||| || Sbjct 457442 AACCACTGA-CACTGAA-GAACGGCACACCAGACTCACCAGCGGTTGCCTTTGCGAGCAG 457499 Query 9871 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--A 9928 ||||||||| ||||| || ||| | |||| ||||||| |||||||| || || Sbjct 457500 AGTCTTACCAGTACCGGGGGGACCAGAAAGGATAGCACCTCTAGGAATCTTTGCTCCGAG 457559 Query 9929 CTTCCAAAGTATCTCTCAGGTTGCTT-AAGAA 9959 |||| | |||||||||| | ||| ||||| Sbjct 457560 CTTC--TGGAATCTCTCAGGCTCCTTCAAGAA 457589 >seq24 Length=268411 Score = 84.2 bits (92), Expect = 3e-11 Identities = 197/290 (68%), Gaps = 12/290 (4%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 ||||||||||| || || |||| ||| ||| ||||||||||| ||| | || || Sbjct 192648 AGACCCTTGATATGACTTCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCGTAG 192589 Query 169229 CGAAG---CTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTG 169285 ||||| || || | ||| || ||||| ||||| || |||| | || |||| Sbjct 192588 CGAAGACCCTTGGTA---TCTGTGTACTCCTTCTTGTGTTGCAGTCCCATAAACTGCTTG 192532 Query 169286 A-GATCGTTGAACTCTTGGTTTGAT-GTGAGCTGTGTGACAGAGGCATCGCGAACATTCT 169343 | | || |||| | || || | | | ||| ||| || || |||||||| ||| Sbjct 192531 ATGTTC--TGAATTTCTGCGTTCTTCGAAATCTGATCGACTGATGCGTCGCGAACGTTCA 192474 Query 169344 TACA-CTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGACCC 169402 ||| ||| ||||| ||||||||||||||| | |||| | ||| || | | || Sbjct 192473 -ACATCTTACCACGCAGAGGGAAGACACCGAACAGATCCTGGTTAACAACAGCTCGTCCA 192415 Query 169403 GCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 || | |||||| | ||||||||||| || || | |||||| ||||| Sbjct 192414 GCAAGTGCGAGCATAGCAGCCGAGTCACCTTCTGTCAAGATGAGAGTACA 192365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259582443080