Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq75 123 8e-23
seq21 120 9e-22
seq26 109 2e-18
seq98 100 9e-16
>seq75
Length=287068
Score = 123 bits (136), Expect = 8e-23
Identities = 233/342 (68%), Gaps = 3/342 (1%)
Strand=Plus/Minus
Query 349547 TCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACT 349606
|| ||| | || | ||| ||||||||| |||| ||| | || | ||||| | || ||
Sbjct 197132 TCCATGATCTTGGGTAAGATGAAGGAAGTTGCCGAATCGTACCTCGGTGAGAAGGTCACC 197073
Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666
| |||||| | || || || ||||| || || || ||||||||| | || || ||||||
Sbjct 197072 AACGCTGTTGTCACCGTTCCCGCCTACTTCAACGACGCCCAGCGTGCCGCCACCAAAGAT 197013
Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726
|| || | ||| || || | || ||||| | | | || || ||||| || || ||
Sbjct 197012 GCCGGTACCATCGCCGGTCTCAACGTTCTCCGTGTCGTCAACGAGCCCACCGCCGCCGCC 196953
Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786
| || || || || || || || ||| | ||| | || | | | ||| |
Sbjct 196952 CTCGCCTACGGTCTCGACAA---GACCGACAAGGAACGCCAGATCATCGTCTACGATCTT 196896
Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846
||||||||||| || ||||| || | || || | || || || |||| |||||| |
Sbjct 196895 GGTGGTGGTACCTTCGATGTCTCCATTCTGACTGTCGATGACGGTGTTTTCGAAGTTCAG 196836
Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888
|| ||||| ||||| || ||||| ||||| || || || |||
Sbjct 196835 GCTACTGCCGGTGACACCCATCTCGGTGGTGAGGACTTCGAT 196794
>seq21
Length=270181
Score = 120 bits (132), Expect = 9e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || ||||| || || || || || || || ||
Sbjct 161195 CATACCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTC 161254
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||| ||||| || || ||||| ||||| || || ||||| || ||
Sbjct 161255 GGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGG 161314
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || || ||||| || || | || ||||| || || | || || | ||
Sbjct 161315 GGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTC 161374
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| ||||| || | ||||| ||||| || || || || || ||||||||
Sbjct 161375 GACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425
Score = 102 bits (112), Expect = 2e-16
Identities = 151/209 (72%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | || || || || ||||| || || || || || || || ||
Sbjct 161423 CATACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTC 161482
Query 140567 AGATAATGTT-CGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625
| ||| | | || || || || || || || ||||||||||| || || |||||||| |
Sbjct 161483 -GCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCG 161541
Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGT 140684
||||||| ||||| || || || || || ||| || || || ||||| | || ||||
Sbjct 161542 GAGGAATGCCTTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCAATGGTGTCGGATGAC 161600
Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
|| || ||||| || | ||||| |||||
Sbjct 161601 TCGACCTCAAGGGTGATGGTCTTGCCGGT 161629
>seq26
Length=70271
Score = 109 bits (120), Expect = 2e-18
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567
||||||||||| | | || ||||| |||||||| ||||| || || || || || ||
Sbjct 12750 ATACCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 12809
Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627
|| | || || ||||| ||||| || ||||| || ||||| || || || || || ||
Sbjct 12810 GAAAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGG 12869
Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || || ||||| || || ||| || || || || || | ||||| | ||
Sbjct 12870 GGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCAGAGGACTC 12928
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728
|| ||||| || | ||||| || || || || || || ||
Sbjct 12929 GACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970
>seq98
Length=681927
Score = 100 bits (110), Expect = 9e-16
Identities = 418/655 (64%), Gaps = 15/655 (2%)
Strand=Plus/Minus
Query 349251 ATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTG 349310
|||| || | || || ||||| || || || |||||| | || || || || | |||||
Sbjct 607099 ATGACCGCATTGAGATCATTGCCAACGACCAGGGTAACCGCACCACTCCCTCGTTCGTTG 607040
Query 349311 CATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATC 349370
| || ||||| || |||||| |||| |||||||| || || || || | || || |
Sbjct 607039 CCTTCACCGACACCGAGCGTTTGATCGGTGATTCGGCCAAGAACCAGGTCGCCATGAACC 606980
Query 349371 CAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACA 349424
| | || || || || || || ||||| || || || | ||||| | ||||
Sbjct 606979 CTCACAACACCGTCTTCGACGCCAAGCGCCTCATCGGCCGCAAGTTCGCCGATGCTGAGG 606920
Query 349425 AATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA 349484
|| || | || | || || || || || | || | | | ||| | || |
Sbjct 606919 --TC----CAGGCCGACATGAAGCACTTCCCCTTCAAGGTCAT-CGACAAGGC--TGGCA 606869
Query 349485 AACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTT 349544
| || | | |||| || | || ||||| | || || ||||| || || |
Sbjct 606868 AGCCCGTCGTCCAGGTCGAGTTCAAGGGTGAGGAGAAGACCTTCACTCCCGAGGAGATCT 606809
Query 349545 CATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAA 349604
| || |||||| | || ||| || | |||||| | || | |||| || || |
Sbjct 606808 CCTCCATGGTTCTCACCAAGATGCGTGAGACTGCTGAGTCTTACCTTGGTGGCACCGTCA 606749
Query 349605 CTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAG 349664
| ||||| | ||||| || || || || || || | ||||| || || || |
Sbjct 606748 ACAACGCTGTCGTCACTGTTCCCGCATACTTCAACGACTCTCAGCGCCAGGCTACCAAGG 606689
Query 349665 ATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAG 349724
|||| || ||||| || | || || || | || || || || || || || || |
Sbjct 606688 ATGCCGGTCTGATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTG 606629
Query 349725 CAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATT 349784
| ||||| || || || || || | | ||| || || | || || || |||
Sbjct 606628 CCATTGCCTACGGTCTCGACAAGAAGGTTGAGGGTGAGCGCAACGTCCTCATCTTCGATC 606569
Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTA 349844
| |||||||||||||| ||||| || || || || |||| ||||| || || || || |
Sbjct 606568 TTGGTGGTGGTACTTTCGATGTCTCTCTCCTCACCATTGAGGAGGGTATCTTCGAGGTCA 606509
Query 349845 AAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899
| | ||||| ||||| || || | ||||| || || || || || ||||| ||
Sbjct 606508 AGTCTACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTTGT 606454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515251157829101
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |