Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq75 123 8e-23 seq21 120 9e-22 seq26 109 2e-18 seq98 100 9e-16 >seq75 Length=287068 Score = 123 bits (136), Expect = 8e-23 Identities = 233/342 (68%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 349547 TCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACT 349606 || ||| | || | ||| ||||||||| |||| ||| | || | ||||| | || || Sbjct 197132 TCCATGATCTTGGGTAAGATGAAGGAAGTTGCCGAATCGTACCTCGGTGAGAAGGTCACC 197073 Query 349607 GATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGAT 349666 | |||||| | || || || ||||| || || || ||||||||| | || || |||||| Sbjct 197072 AACGCTGTTGTCACCGTTCCCGCCTACTTCAACGACGCCCAGCGTGCCGCCACCAAAGAT 197013 Query 349667 GCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCA 349726 || || | ||| || || | || ||||| | | | || || ||||| || || || Sbjct 197012 GCCGGTACCATCGCCGGTCTCAACGTTCTCCGTGTCGTCAACGAGCCCACCGCCGCCGCC 196953 Query 349727 ATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTA 349786 | || || || || || || || ||| | ||| | || | | | ||| | Sbjct 196952 CTCGCCTACGGTCTCGACAA---GACCGACAAGGAACGCCAGATCATCGTCTACGATCTT 196896 Query 349787 GGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAA 349846 ||||||||||| || ||||| || | || || | || || || |||| |||||| | Sbjct 196895 GGTGGTGGTACCTTCGATGTCTCCATTCTGACTGTCGATGACGGTGTTTTCGAAGTTCAG 196836 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || ||||| ||||| || ||||| ||||| || || || ||| Sbjct 196835 GCTACTGCCGGTGACACCCATCTCGGTGGTGAGGACTTCGAT 196794 >seq21 Length=270181 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || || || ||||| || || || || || || || || Sbjct 161195 CATACCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTC 161254 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| ||||| || || ||||| ||||| || || ||||| || || Sbjct 161255 GGAGAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGG 161314 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || | || ||||| || || | || || | || Sbjct 161315 GGGAATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTC 161374 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || || |||||||| Sbjct 161375 GACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425 Score = 102 bits (112), Expect = 2e-16 Identities = 151/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || || || ||||| || || || || || || || || Sbjct 161423 CATACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTC 161482 Query 140567 AGATAATGTT-CGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 | ||| | | || || || || || || || ||||||||||| || || |||||||| | Sbjct 161483 -GCTAAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCG 161541 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGT 140684 ||||||| ||||| || || || || || ||| || || || ||||| | || |||| Sbjct 161542 GAGGAATGCCTTCCTTGTCTTGGATCTT-GCTCTTGACGTTGTCAATGGTGTCGGATGAC 161600 Query 140685 TCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || ||||| || | ||||| ||||| Sbjct 161601 TCGACCTCAAGGGTGATGGTCTTGCCGGT 161629 >seq26 Length=70271 Score = 109 bits (120), Expect = 2e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || ||||| |||||||| ||||| || || || || || || Sbjct 12750 ATACCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCG 12809 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| ||||| || ||||| || ||||| || || || || || || Sbjct 12810 GAAAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGG 12869 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || ||| || || || || || | ||||| | || Sbjct 12870 GGAATGCCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCAGAGGACTC 12928 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || ||||| || | ||||| || || || || || || || Sbjct 12929 GACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970 >seq98 Length=681927 Score = 100 bits (110), Expect = 9e-16 Identities = 418/655 (64%), Gaps = 15/655 (2%) Strand=Plus/Minus Query 349251 ATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTG 349310 |||| || | || || ||||| || || || |||||| | || || || || | ||||| Sbjct 607099 ATGACCGCATTGAGATCATTGCCAACGACCAGGGTAACCGCACCACTCCCTCGTTCGTTG 607040 Query 349311 CATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATC 349370 | || ||||| || |||||| |||| |||||||| || || || || | || || | Sbjct 607039 CCTTCACCGACACCGAGCGTTTGATCGGTGATTCGGCCAAGAACCAGGTCGCCATGAACC 606980 Query 349371 CAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT-----TTCTGACA 349424 | | || || || || || || ||||| || || || | ||||| | |||| Sbjct 606979 CTCACAACACCGTCTTCGACGCCAAGCGCCTCATCGGCCGCAAGTTCGCCGATGCTGAGG 606920 Query 349425 AATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATA 349484 || || | || | || || || || || | || | | | ||| | || | Sbjct 606919 --TC----CAGGCCGACATGAAGCACTTCCCCTTCAAGGTCAT-CGACAAGGC--TGGCA 606869 Query 349485 AACCAATTATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTT 349544 | || | | |||| || | || ||||| | || || ||||| || || | Sbjct 606868 AGCCCGTCGTCCAGGTCGAGTTCAAGGGTGAGGAGAAGACCTTCACTCCCGAGGAGATCT 606809 Query 349545 CATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAA 349604 | || |||||| | || ||| || | |||||| | || | |||| || || | Sbjct 606808 CCTCCATGGTTCTCACCAAGATGCGTGAGACTGCTGAGTCTTACCTTGGTGGCACCGTCA 606749 Query 349605 CTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAG 349664 | ||||| | ||||| || || || || || || | ||||| || || || | Sbjct 606748 ACAACGCTGTCGTCACTGTTCCCGCATACTTCAACGACTCTCAGCGCCAGGCTACCAAGG 606689 Query 349665 ATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAG 349724 |||| || ||||| || | || || || | || || || || || || || || | Sbjct 606688 ATGCCGGTCTGATTGCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACCGCCGCTG 606629 Query 349725 CAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATT 349784 | ||||| || || || || || | | ||| || || | || || || ||| Sbjct 606628 CCATTGCCTACGGTCTCGACAAGAAGGTTGAGGGTGAGCGCAACGTCCTCATCTTCGATC 606569 Query 349785 TAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTA 349844 | |||||||||||||| ||||| || || || || |||| ||||| || || || || | Sbjct 606568 TTGGTGGTGGTACTTTCGATGTCTCTCTCCTCACCATTGAGGAGGGTATCTTCGAGGTCA 606509 Query 349845 AAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 | | ||||| ||||| || || | ||||| || || || || || ||||| || Sbjct 606508 AGTCTACTGCCGGTGACACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTTGT 606454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515251157829101