Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq85 210 2e-49 seq21 197 2e-45 seq26 152 6e-32 seq24 107 2e-18 >seq85 Length=501717 Score = 210 bits (232), Expect = 2e-49 Identities = 796/1238 (64%), Gaps = 31/1238 (3%) Strand=Plus/Plus Query 80539 CCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTAC 80598 |||||||| |||| ||| | ||||| ||| | || || || | | | |||||||| Sbjct 350076 CCCCACATATCGTACTGGAGCTCGCCCTTGGACACGGGGGAGCCAGGGTAGGTCTCGTAA 350135 Query 80599 GGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCA 80658 ||||| | ||| |||| || || || | | | || |||||||| ||| ||| Sbjct 350136 GGGCCGAGCTTCTCAGCCAAGTCGCAAGATGCAGTCAAAGCAGCGTGATAGATGGTCTCG 350195 Query 80659 AAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATG 80718 |||| |||| | | |||| || |||||| | || || | | | Sbjct 350196 AAGATCTGGATGTTGAGCTGTCTAGCCTCGGGTGAGTCGAAAGGCATGCGGAGGGCAAGG 350255 Query 80719 AACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGC 80778 || | || || || || ||| |||| |||| || |||||||| ||| || Sbjct 350256 AAGGCATCGGCAAGACCACTAACACCGAGACCGATGGGACGGTGGCGGAAGTTAC-TCTT 350314 Query 80779 TCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAAC 80837 || ||||| || | ||||| ||| | ||||||| ||||| ||| || || Sbjct 350315 GCGAGCCTCAGGGACAGGGTAGTGGTTGATCTCGATGATCTTGTTCAAGTTCTTGGTGAC 350374 Query 80838 AACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCA------CAAA 80891 ||| | ||| || || || |||| || ||||| | | | | |||| | || Sbjct 350375 GACCTGAACAACCTCGTGGAGCTTCTTGAAATCGAACTTCTCCTCGTTCATGTCGACGAA 350434 Query 80892 TGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 | |||||| || || |||| ||||| ||||| ||||| || | | | || |||| Sbjct 350435 GGTGGGAAGGGCAAGAGAAGCCAAGTTGCAGACGGCAACCTCATCGGGAGCGGTGTACTC 350494 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 || || || |||||||| || || ||| ||| ||||| |||||||| ||| Sbjct 350495 GATAATCTCGGTGCACAAGTTGGAGCTGCGAATGACACCAAGGTTCTTCTGGTTGCTCTT 350554 Query 81012 GGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAG 81071 | ||||||||| ||||||||| |||| | ||| |||| |||||| || | || ||| Sbjct 350555 GCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTACCAGTCTCGGTTTGAGCCTCGAG 350614 Query 81072 GATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATA 81131 |||||||| ||| | || | || || | ||| || ||| | | || Sbjct 350615 GATGGCGTACCAGAGCTTCTGAGCGCGGATGGTGTCGCGACCACGACCCTCGCGCTCGTA 350674 Query 81132 CTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTT 81191 ||| |||| | ||||||| |||||| | || | || | ||||||||| | Sbjct 350675 CTTCTCGTACAAGGCCTCGAACTCATCACCGTAGACATCGGCAAGACCAGGGCACTCGCT 350734 Query 81192 AGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGAT 81251 ||||||||||| |||| || || | ||| ||| ||||||||| || ||||| Sbjct 350735 GGGGCACATCAGAGTCCAGGTGGAGTTTTGCTCCACACGCTTCATGAAGAGATCGGGGAT 350794 Query 81252 CCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCA 81310 |||||||||| ||| |||||||| ||| || ||||||| | || ||||| ||| | Sbjct 350795 CCAGAGGGCGTAGAAGAGGTCGCGAGCA-CGAACCTCCTCCTTGCCGTGGTTCTTGCGGA 350853 Query 81311 ACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCT 81370 ||||| || | | || || || ||||| ||||| || || | ||||| | || Sbjct 350854 GGTCGAGGAAAGCGAAGACATCAGCGTGCCAAGGCTCGAGGTAGATGGCGAAGGCACC-- 350911 Query 81371 TGCGACG------GCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACA 81424 | |||| ||||||||||| || || | |||||| ||| || ||||| | || Sbjct 350912 -GGGACGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTTGAAGACACGGAGCA 350970 Query 81425 TAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA 81484 | || | | ||| | || |||||| ||||| |||| || || |||| || | Sbjct 350971 TGGGAACAAGACCGTTCGAGGTACCGTTGGTACCAGCGATGTAAGAGCCAGTGGCACGAA 351030 Query 81485 CCTTGC--TGA---TTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCG 81539 ||| ||| ||| ||||| || ||||| | ||| || ||| || || Sbjct 351031 ---TGCAGTGAGCGTTG--AGACCAATACCACCAGCGTTCTTCGAGATCATGGCGCAGGT 351085 Query 81540 GTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCT 81599 || | ||| || || || || || || ||| | |||||||| | || ||| || Sbjct 351086 CTTGAGGGTGTCGTAGATACCGTCAATCGAATCATCCTTCATGTCGATCAGGAAGCATGA 351145 Query 81600 TGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATA 81659 | | |||||| | |||||| ||||||| || || | ||||| |||| || Sbjct 351146 AGCGAGCTGAGGCTGGGGAGTGCCGGCGCTGAACAGAGTAGGCGAGGCGTGGGTGAAGTA 351205 Query 81660 ACGGTTTGACATCAGGTCATAGGTTTCCTTGAC-GCGTGGAATATCGTCACCGTGAATAC 81718 | ||||||| || || ||||| || | || | ||| || || ||||| || | Sbjct 351206 CTTGAGCGACATCAAGTTGTATGTTTCGATGGCAGCCT-CAATGTCCTCGCCGTGGATGC 351264 Query 81719 CGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 ||| ||| |||||||| | ||| | |||||| ||||| Sbjct 351265 CGACAGCAACACGCATGATCATCTGCTGGGGTCTCTCG 351302 >seq21 Length=270181 Score = 197 bits (218), Expect = 2e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || ||||||||||| ||||| Sbjct 161425 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGTCC 161366 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || |||||||||||||| ||||| ||||||||| Sbjct 161365 GACACCATCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 161306 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| || ||||||| ||||| || | ||||| || Sbjct 161305 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACTCTCTCCGACTACAAC 161246 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||||||||| || || ||| | |||||||| ||||| Sbjct 161245 ATCCAGAAGGAATCCACTCTCCACCTCGTCCTCCGTCTTCGTGGTGG 161199 Score = 167 bits (184), Expect = 3e-36 Identities = 161/204 (79%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || || |||||||| |||||| || | ||||| || | ||| Sbjct 161629 ACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCCGACACCATTGACAACGTCAAGAGC 161570 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || |||||||| || |||||||| || |||||||| || || |||||||| ||| Sbjct 161569 AAGATCCAAGACAAGGAAGGCATTCCTCCGGATCAGCAGCGCCTCATCTTTGCTGGCAAG 161510 Query 27550 CAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608 || |||||||| | ||| ||||| ||| ||||| || |||| |||||||||||||| || Sbjct 161509 CAGCTCGAGGACGGTCGCACCCTTAGC-GACTACAACATCCAGAAGGAATCCACTCTCCA 161451 Query 27609 TCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | |||||||||||||| Sbjct 161450 CCTCGTCCTCCGTCTTCGCGGTGG 161427 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| ||||| || ||||| || || | || || || ||| Sbjct 161197 ATGCAGATCTTCGTCAAGACTCTTACTGGAAAGACCATCACATTGGAAGTGGAATCATCA 161138 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | || || |||||||||||||| || || || |||||| Sbjct 161137 GACACCATCGACAACGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 161078 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| | ||||| | |||||| || | ||||| || Sbjct 161077 CAGCGCCTGATCTTCGCCGGAAAGCAGTTGGAGGACGGTCGTACGCTCTCTGACTACAAC 161018 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| ||||| || || || || Sbjct 161017 ATCCAGAAGGAGTCAACCCTCCA 160995 >seq26 Length=70271 Score = 152 bits (168), Expect = 6e-32 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| |||||||| ||||| |||||||| || || |||||||| ||||| ||| | ||| Sbjct 12971 CTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCTGACACCAT 12912 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | || | ||| || || |||||||||||||| ||||| || ||||| ||||| || Sbjct 12911 CGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 12852 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || || || || ||||| || ||||||| || || || | ||||| || |||| || Sbjct 12851 GATCTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACTCTTTCCGACTACAACATCCAGAA 12792 Query 27594 GGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||| || |||||||| || ||| | ||||| || ||||| Sbjct 12791 GGAGTCGACTCTTCACCTTGTCCTCCGTCTCCGTGGTGG 12753 >seq24 Length=268411 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| || || || ||||| ||||| || || || ||||| ||||| |||||| Sbjct 107972 GACAAGGAGGGTATCCCCCCGGACCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAG 107913 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||| |||||||| | ||||| || |||| ||||| ||||||||| || ||| | Sbjct 107912 GATGGCCGTACCCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTTCACCTCGTCCTC 107853 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 107852 CGCCTCCGTGGTGG 107839 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 30361 ATCTGGATCCCCGAACTCATTTTTGGGCACCTTTTGACAAGCTCCAACTACAACGACGAG 30420 |||| ||||| || | |||||||| ||||| | ||| |||||||||| | ||||| Sbjct 191396 ATCTACATCCCGGAGATGATTTTTGGTCACCTCCTCACATCCTCCAACTACGATGACGAT 191455 Query 30421 GAGCAGCGCGTGACGGGTGGACGAAATGGCTACGGTGCAAAGCTCGCCAACGTTTTCAG 30479 ||||| || || |||||| |||| || || |||||||||||| ||||| ||||| Sbjct 191456 GAGCAAAAGGTCACTGGTGGAAGAAACGGTTATGGTGCAAAGCTCTGTAACGTCTTCAG 191514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309209477040