Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq21 84.2 1e-11 seq24 82.4 5e-11 >seq21 Length=270181 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| | | |||||| ||||| || |||||| || ||||| || || || Sbjct 160971 CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 161030 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || | || || ||||| || || | ||||| |||||||| || Sbjct 161031 AGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 161090 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || ||| | || |||||| ||||| Sbjct 161091 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCAC 161149 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| || || || || || || | || || || || |||||||| Sbjct 161150 TTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197 >seq24 Length=268411 Score = 82.4 bits (90), Expect = 5e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||||||||||| || ||||| || || || || || || | || || || || Sbjct 107863 TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGC 107922 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || || || || | |||||||||||||| || | |||||||||||||| Sbjct 107923 TTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTCTGT 107975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314728959426911