Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016-
12-23] 167 sequences; 28,173,731 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq26 187 6e-42
seq21 176 1e-38
seq24 107 4e-18
seq64 86.0 1e-11
>seq26
Length=70271
Score = 187 bits (206), Expect = 6e-42
Identities = 163/203 (80%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||||||||| ||||| || |||||||| || || | ||| || | |||||
Sbjct 12768 AGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCATCC 12827
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || |||||||| ||||| |||||||| || |||| || |||||||||
Sbjct 12828 TCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCC 12887
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| ||||||||||||||| || ||||| || ||||| |||
Sbjct 12888 TGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGGGTGATGGTC 12947
Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105
|| ||||| || ||||| || ||
Sbjct 12948 TTGCCCGTAAGGGTCTTGACGAA 12970
>seq21
Length=270181
Score = 176 bits (194), Expect = 1e-38
Identities = 172/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| ||||| |||||||| || || |||||||| || || | || ||
Sbjct 161204 ACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGT 161263
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| || ||||||||||| |||||||| ||||| || ||||| || |||| ||
Sbjct 161264 ACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCC 161323
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || || || ||||||||||| || || ||||| ||
Sbjct 161324 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAG 161383
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || ||||| ||||| || || | ||||||
Sbjct 161384 AGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425
Score = 158 bits (174), Expect = 3e-33
Identities = 168/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||||||||| || || | ||| || || ||||| || |||||||| || || | || ||
Sbjct 160976 ACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGT 161035
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || |||| |||||| || |||||||| ||||| || ||||| || || | ||
Sbjct 161036 ACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACC 161095
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||||||||||||||| || ||||| ||||||||||| || ||| || || |
Sbjct 161096 CTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAA 161155
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| |||||||| || |||||||| || || | ||||||
Sbjct 161156 TGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197
Score = 147 bits (162), Expect = 5e-30
Identities = 152/199 (76%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | ||||| ||||| |||||||| || || |||||||| || || ||||||
Sbjct 161433 CGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTAAGGGTG 161492
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| || || || ||||||||||| || ||||| ||||| || || || ||||||| |||
Sbjct 161493 CGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGAATGCCT 161552
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|||||||| |||||||| || ||||| || |||||||| || || ||||| ||
Sbjct 161553 TCCTTGTCTTGGATCTTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGACCTCAAGG 161612
Query 211074 GTGATCGTCTTTCCCGTGA 211092
||||| ||||| || ||||
Sbjct 161613 GTGATGGTCTTGCCGGTGA 161631
>seq24
Length=268411
Score = 107 bits (118), Expect = 4e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||||||| ||| || |||||||| || || | ||||| | |||||
Sbjct 107854 AGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGGCCATCC 107913
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| ||||||||||| |||||||| ||||| |||||||| || || | || ||||||||
Sbjct 107914 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGGATACCCTCCTTGTC 107972
>seq64
Length=182728
Score = 86.0 bits (94), Expect = 1e-11
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 139807 CTTCCAAAGAAGCACGGAAGAGGAGGACAATCTGCTCTGCGTTTTGAAAGACTTCGAAAG 139866
||||| ||||||||||| | || || || ||||| |||||||| | | || || ||
Sbjct 82120 CTTCCCAAGAAGCACGGTCGTGGTGGTCAGTCTGCCCTGCGTTTCGCCCGTCTGCGTGAG 82179
Query 139867 GAAAAGAGGCACAACTACTTGAGAAAAGTTGCAGAGAACGCAATACAGTGTTTTATCAAA 139926
|| ||| | ||||||||| | | || || || || |||| ||||| || ||||
Sbjct 82180 GAGAAGCGTCACAACTACGTCCGCAAGGTCGCCGAACACGCCGTACAGAACTTCATCACC 82239
Query 139927 GACAACAAGTGTTTTGTTTCTGGTATTGTTTTGGCAGGTTCCGCAGAGTTCAAGA 139981
||||||||| ||| ||||| | || | || |||||||| || |||||||
Sbjct 82240 GACAACAAGGTCAACGTTGCTGGTCTCATTCTTGCTGGTTCCGCCGATTTCAAGA 82294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159149519776955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |