Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq26 127 5e-24 seq21 123 6e-23 >seq26 Length=70271 Score = 127 bits (140), Expect = 5e-24 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||||||||| |||||||| ||||| || ||||||||||| |||| | ||| | Sbjct 12761 GAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCG 12820 Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 ||||| || || ||||| ||||||||||| || | ||| ||||||| | || || Sbjct 12821 GCCATCCTCAAGCTGCTTT--CCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCC 12878 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| || || || || ||||| | || | | |||| || ||| || ||||| Sbjct 12879 TCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGACCTCAAGG 12938 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 || || || |||||||| || ||||| |||||| Sbjct 12939 GTGATGGTCTTGCCCGTAAGGGTCTTGACGAAG 12971 >seq21 Length=270181 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || ||||| || || || ||||||||||| |||| | ||| | ||||| Sbjct 161213 GAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCATC 161272 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || |||||||| || | ||||||||| | | || || ||||| || Sbjct 161273 CTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC 161332 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || |||||| | || | | |||| || ||| || |||||||| || || Sbjct 161333 CTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGAGTGATGGT 161392 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 161393 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425 Score = 104 bits (114), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | || || || ||||| || ||||||||||| || | | || | Sbjct 160980 AGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTACGA 161039 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 || || || | ||||| ||||||||||| || | ||||||||||| | ||| || | Sbjct 161040 CCGTCCTCCAACTGCTTT--CCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCT 161097 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || || || || ||||| | || | | ||||||| || ||||| | | Sbjct 161098 CCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCTGATGATTCCACTTCCAATG 161157 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || || || || |||||||| ||||||| |||||| Sbjct 161158 TGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818331184057