Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq26 159 7e-34 seq21 159 7e-34 seq24 111 3e-19 >seq26 Length=70271 Score = 159 bits (176), Expect = 7e-34 Identities = 169/220 (77%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| | Sbjct 12752 ACCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 12811 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||||| || |||||||| || Sbjct 12812 AAGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGG 12871 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| ||||||||||| |||||| ||||| || ||| | ||||| ||||| || | |||| Sbjct 12872 AATGCCCTCCTTGTCCTGGATC-TTGCTCTTGACGTTGTCGATGGTGTCAGAGGACTCGA 12930 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 | || || ||||| ||||| ||||| | ||||| ||||| Sbjct 12931 CCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970 >seq21 Length=270181 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| ||| || |||||||||||||| | Sbjct 161198 ACCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 161257 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || ||||||| || || ||||| || Sbjct 161258 GAGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGG 161317 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||| ||||| || | ||||| Sbjct 161318 AATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGAC 161377 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| ||||| |||||||| Sbjct 161378 CTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||||||||||| ||||| || || ||||| | || || ||||| ||| Sbjct 161007 TCCTTCTGGATGTTGTAGTCAGAGAGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAG 161066 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| || || ||||| || |||||||||||||| |||||||| | || ||| | Sbjct 161067 ATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG 161126 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | ||| ||||| | ||||| ||||| || || | |||||| ||| Sbjct 161127 TCGATGGTGTCTGATGATTCCACTTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACG 161186 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 161187 AAGATCTGCAT 161197 Score = 120 bits (132), Expect = 6e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || || || | ||| ||| || |||||||||||||| Sbjct 161426 ACCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCT 161485 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| || ||||| || || || || |||||||| | || || || || || Sbjct 161486 AAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGG 161545 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || ||||||||||||||| ||||| || ||| | || || ||||| || | |||| Sbjct 161546 AATGCCTTCCTTGTCTTGGATC-TTGCTCTTGACGTTGTCAATGGTGTCGGATGACTCGA 161604 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | || || ||||| ||||| || || Sbjct 161605 CCTCAAGGGTGATGGTCTTGCCGGT 161629 >seq24 Length=268411 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||||| || || |||||||||||||| | Sbjct 107838 ACCACCACGGAGGCGGAGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 107897 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||||||||| || || || || || ||||||| || |||||||| || Sbjct 107898 GAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGG 107957 Query 282992 AATACCCTCCTTGTCT 283007 ||||||||||||||| Sbjct 107958 GATACCCTCCTTGTCT 107973 Score = 93.3 bits (102), Expect = 9e-14 Identities = 201/290 (69%), Gaps = 12/290 (4%) Strand=Plus/Minus Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAACA- 274489 ||||| || ||||| |||| | |||||| || |||| | |||| |||||| |||| Sbjct 192729 ACGATAGGTGTGATGAATTCCAGCAGGAACCCAGGAAGCTTAAGCAAACTGGG-AAACTG 192671 Query 274490 -ACTATGGAAAAAGTTCATGACAAGACC--TGATATGTGAGTTCCGTCAACGTCGGCATC 274546 ||| || || ||||| || | |||||| ||||||| | |||| || || ||| Sbjct 192670 GACT-TGCAAGAAGTTGATCAAAAGACCCTTGATATG--ACTTCCATCGTGATCCTGATC 192614 Query 274547 TGTCATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCCTGT 274606 ||||||||||| | ||| || || ||||| |||||| | ||| ||| | ||| Sbjct 192613 GGTCATGATCATCAGATGGCCGTAGCGAAGACCCTTGGTATCTGTGTACTCCTT-CTTGT 192555 Query 274607 -TTGAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATACTCGCC 274664 ||| || || | || ||||||| | | | |||||| ||||||| | || | Sbjct 192554 GTTGCAGTCCCATAAACTGCTTGATGTTCTG-AATTTCTGCGTTCTTCGAAATCTGATCG 192496 Query 274665 ACAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCC 274714 || || || || || ||||||| || |||||| || |||||||| || || Sbjct 192495 ACTGATGCGTCGCGAACGTTCAACATCTTACCACGCAGAGGGAAGACACC 192446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046736960305218