Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aureobasidium_20sp._20FSWF8-4_20[genbank_20GCA_5F001914275.1_202016- 12-23] 167 sequences; 28,173,731 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq21 141 9e-29 seq26 136 4e-27 seq24 132 4e-26 >seq21 Length=270181 Score = 141 bits (156), Expect = 9e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| |||||||| ||||| ||||||||| Sbjct 161199 CCACCACGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAG 161258 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||| ||||| ||||||||||| ||||| | |||| Sbjct 161259 AGAGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCTGGGGGA 161318 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | |||||| |||||| | Sbjct 161319 ATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATGGTGTCGGACGACTCGA 161376 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || || || || || || ||||| ||||| |||||||| Sbjct 161377 CCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 161425 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || | | ||||| || || || ||||||||| ||||| ||||| ||| Sbjct 160971 CCGCCACGAAGTCTGAGCACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGAG 161030 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || | |||||| |||||||| ||||||||||| ||||||| ||| Sbjct 161031 AGCGTACGACCGTCCTCCAACTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 161090 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||| ||| | | | ||||| || ||||| Sbjct 161091 ATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTGTCTGATGATTCCAC 161149 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || || || ||||| ||||| |||||||| Sbjct 161150 TTCCAATGTGATGGTCTTTCCAGTAAGAGTCTTGACGAAGATCTGCAT 161197 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | || || || || ||| |||||||| ||||| |||||| Sbjct 161427 CCACCGCGAAGACGGAGGACGAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTA 161486 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| || || || |||||||| || |||| ||| Sbjct 161487 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGAGGA 161546 Query 41756 ACGCTCTCCTTGTC 41769 | || |||||||| Sbjct 161547 ATGCCTTCCTTGTC 161560 >seq26 Length=70271 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| |||||||| Sbjct 12753 CCACCACGGAGACGGAGGACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 12812 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||| |||||||| ||||||||||||||||||| |||| Sbjct 12813 AGAGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGTTGGTCCGGGGGA 12872 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | ||||| ||||| || Sbjct 12873 ATGCCCTCCTTGTCCTGGATCTTGCTCTT-GACGTTGTCGATGGTGTCAGAGGACTCGAC 12931 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAA 41853 ||| | || || || || ||||| || ||||| ||||| Sbjct 12932 CTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 12970 >seq24 Length=268411 Score = 132 bits (146), Expect = 4e-26 Identities = 112/138 (81%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || |||||||||||||| ||||| ||||| Sbjct 107835 ACCACCACCACGGAGGCGGAGGACGAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTC 107894 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||||||||| || | || |||||||||||||| ||||| ||||||||||||||||||| Sbjct 107895 GGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGG 107954 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||| | | ||||||||| Sbjct 107955 GGGGATACCCTCCTTGTC 107972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303034940400