Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq2 122 2e-22
seq1 93.3 9e-14
>seq2
Length=6127077
Score = 122 bits (134), Expect = 2e-22
Identities = 274/404 (68%), Gaps = 6/404 (1%)
Strand=Plus/Minus
Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296
||||||| ||||| ||| || | ||||| ||||| | || |||||| |||
Sbjct 687552 CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCA 687493
Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355
|| ||||||||||| ||||| || | | |||| | || | || || | ||| ||
Sbjct 687492 TCTCGCGCGACGAGGGCCTCCA-CACCGACTTCGCCTGCCTCCTCTACTCCCACCTCAAG 687434
Query 230356 AACAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414
||| || | || | || ||| || ||||| || || || || | ||| |
Sbjct 687433 CACAGGCCCAGCAAGCAGCTCGTTCAG-CAGATCATCACCGACGCCGTCGCGCTCGAGCA 687375
Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACTTATGG 230473
||||||| | || ||| | || || |||| | | ||||||||||| || |||
Sbjct 687374 GGAGTTCCTCACCGAGGCTCTCCCCTG-CGCCATGCTCGGCATGAACGCCACCCTCATGA 687316
Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533
||||||||||| ||||| |||||| | | | || || || || |||| || || |
Sbjct 687315 AGCAGTACATCGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGCAACGACAAGGTCT 687256
Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593
|||| || | |||||||| | ||||||||| ||| || || || ||||||||||
Sbjct 687255 ACAAGTCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACT 687196
Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
||||||| ||||| ||| | ||||| |||| | | || || |||
Sbjct 687195 TCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCCGGCGTCATG 687152
>seq1
Length=7551078
Score = 93.3 bits (102), Expect = 9e-14
Identities = 229/345 (66%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 319324 AGGAACCCGGGCTCGGGGAACTTCCACGTGGTC-TTCGTCTCGGTAAGGGCGTAGTAACT 319382
|||| |||||| ||||||||| || || | || | ||| || | |||||| ||
Sbjct 148881 AGGATGCCGGGCGGGGGGAACTTGAAC-TGCACGTTGGAGGCGGAGAGCGTGTAGTAGCT 148823
Query 319383 CGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTT 319442
| | ||||| |||| ||| ||||| | | ||| || ||| |||| | | |||||
Sbjct 148822 CTTGGCCTCGGGCCGCTGCTTGACGAAAGCCGCCAGGTTGCCCGTGTAGTGCGCGAGCTT 148763
Query 319443 TAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTG 319502
||| | ||||| ||| || ||| || |||||||||| || ||||||||
Sbjct 148762 CTTGTTGGCCTCGTAGTGGTAGATGTCCGTGGTGACCTCGTCGAGGAAGCCCGAGTCGTG 148703
Query 319503 TGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCAC 319562
||||| |||| || | || ||| | || | | ||||| | || |||| |
Sbjct 148702 GGACACGATCAGGCTGGTAATCTCCGTGTGGGTCTTGAGGTAGTTCTGCAGCCACGCGAT 148643
Query 319563 GTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAG 319622
||| | || || ||||||||||||||||| || || || | | || ||| | ||
Sbjct 148642 GTTGGCGACGTCCAGGTGGTTGGTCGGCTCGTCGAGCAGGAGCACGTCCGCCTTCTGCAG 148583
Query 319623 CATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667
||| || | || || ||||| ||||| ||||| || || || ||
Sbjct 148582 CATCGCCCTGGCGAGGGCGAGCTTCATCTTCCAGCCGCCCGAGAG 148538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823769592710
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |