Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2 122 2e-22 seq1 93.3 9e-14 >seq2 Length=6127077 Score = 122 bits (134), Expect = 2e-22 Identities = 274/404 (68%), Gaps = 6/404 (1%) Strand=Plus/Minus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| ||||| ||| || | ||||| ||||| | || |||||| ||| Sbjct 687552 CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCA 687493 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || ||||||||||| ||||| || | | |||| | || | || || | ||| || Sbjct 687492 TCTCGCGCGACGAGGGCCTCCA-CACCGACTTCGCCTGCCTCCTCTACTCCCACCTCAAG 687434 Query 230356 AACAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414 ||| || | || | || ||| || ||||| || || || || | ||| | Sbjct 687433 CACAGGCCCAGCAAGCAGCTCGTTCAG-CAGATCATCACCGACGCCGTCGCGCTCGAGCA 687375 Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATT-GGCATGAACGCTGAACTTATGG 230473 ||||||| | || ||| | || || |||| | | ||||||||||| || ||| Sbjct 687374 GGAGTTCCTCACCGAGGCTCTCCCCTG-CGCCATGCTCGGCATGAACGCCACCCTCATGA 687316 Query 230474 GACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGT 230533 ||||||||||| ||||| |||||| | | | || || || || |||| || || | Sbjct 687315 AGCAGTACATCGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGCAACGACAAGGTCT 687256 Query 230534 ACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACT 230593 |||| || | |||||||| | ||||||||| ||| || || || |||||||||| Sbjct 687255 ACAAGTCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACT 687196 Query 230594 TCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||| ||||| ||| | ||||| |||| | | || || ||| Sbjct 687195 TCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCCGGCGTCATG 687152 >seq1 Length=7551078 Score = 93.3 bits (102), Expect = 9e-14 Identities = 229/345 (66%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 319324 AGGAACCCGGGCTCGGGGAACTTCCACGTGGTC-TTCGTCTCGGTAAGGGCGTAGTAACT 319382 |||| |||||| ||||||||| || || | || | ||| || | |||||| || Sbjct 148881 AGGATGCCGGGCGGGGGGAACTTGAAC-TGCACGTTGGAGGCGGAGAGCGTGTAGTAGCT 148823 Query 319383 CGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTT 319442 | | ||||| |||| ||| ||||| | | ||| || ||| |||| | | ||||| Sbjct 148822 CTTGGCCTCGGGCCGCTGCTTGACGAAAGCCGCCAGGTTGCCCGTGTAGTGCGCGAGCTT 148763 Query 319443 TAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTG 319502 ||| | ||||| ||| || ||| || |||||||||| || |||||||| Sbjct 148762 CTTGTTGGCCTCGTAGTGGTAGATGTCCGTGGTGACCTCGTCGAGGAAGCCCGAGTCGTG 148703 Query 319503 TGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCAC 319562 ||||| |||| || | || ||| | || | | ||||| | || |||| | Sbjct 148702 GGACACGATCAGGCTGGTAATCTCCGTGTGGGTCTTGAGGTAGTTCTGCAGCCACGCGAT 148643 Query 319563 GTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAG 319622 ||| | || || ||||||||||||||||| || || || | | || ||| | || Sbjct 148642 GTTGGCGACGTCCAGGTGGTTGGTCGGCTCGTCGAGCAGGAGCACGTCCGCCTTCTGCAG 148583 Query 319623 CATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 ||| || | || || ||||| ||||| ||||| || || || || Sbjct 148582 CATCGCCCTGGCGAGGGCGAGCTTCATCTTCCAGCCGCCCGAGAG 148538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823769592710