Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 165 1e-35 >seq2 Length=6127077 Score = 165 bits (182), Expect = 1e-35 Identities = 459/699 (66%), Gaps = 14/699 (2%) Strand=Plus/Plus Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 || ||||| || | || ||||||| | ||| || || | | || |||||| ||||| Sbjct 2153404 CCGGGACACTCGTTGGGGCACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATG 2153463 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 |||||||| || ||||| || || | || ||||| | || | | ||||| || || Sbjct 2153464 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCG 2153523 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160 |||||| || || ||||| | | | ||||| ||||||||| |||| || ||| Sbjct 2153524 TGATTCTTGCGGAGGTCCAGGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATG 2153583 Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220 | | | ||||| || ||||| || |||||||| | |||| |||||||| || | Sbjct 2153584 GCAAAGGCGCCAGGGCGCTTGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAG 2153643 Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 || | | ||| || || ||||| || || | ||| ||||| |||| ||| || || Sbjct 2153644 ACGCGGAGCATGGGGATGATACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCG 2153703 Query 54281 CTGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338 |||| ||||| | |||| | || || || |||||||| || ||||| | | Sbjct 2153704 GTGGCGCGAATGCGGTGGACGTTGA--GGCCAATGCCACCTGCCATCTTGGAGATCATGG 2153761 Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398 |||| || | ||||| ||||||||||| || || |||||| |||| | | || | Sbjct 2153762 CGCAAGTCTTGAGGGTATCGTAGATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGA 2153821 Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458 | || ||| | || || ||| || || || || | || || || ||||| | Sbjct 2153822 AGCAAGAAGAGAGCTGCGCCTGAGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGG 2153881 Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGAT----AGCT-GAGTCTATATCCCA 54513 |||| | || || | || ||||| ||||| || ||| || | | |||| Sbjct 2153882 TAAAGAACTTGGACGACATGAGGTTGTAGGTCTCAATGACACGCTCGACGTTGTCTCCC- 2153940 Query 54514 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 54573 |||| || || ||||||||||| | ||||||||| || | || ||||||||| Sbjct 2153941 CAGATG----CCCACGGCGACACGCATAATCATGTGCTGGGGCCGCTCGACGATCTTGCC 2153996 Query 54574 GTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 54633 | | || || | ||| || || | || || || ||||| || | ||| || Sbjct 2153997 ATCGAGCTTGAGGAGGTATGACCGCTCGAGCGTCTTGAACCCAAAGTACTGGTAGTTGAA 2154056 Query 54634 GTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTT 54672 ||||| || || | ||| | |||| ||| | ||||| Sbjct 2154057 GTCTCTGTCATAGAGAATGGCGGAGTCGAGCTCCTCCTT 2154095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721473834160