Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 279 5e-70 seq1 158 1e-33 seq5 150 2e-31 >seq2 Length=6127077 Score = 279 bits (308), Expect = 5e-70 Identities = 338/455 (74%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| || || |||||| || | | || ||| |||||| | |||||| Sbjct 687663 AGAAGGCCGACTGGGCTCTCCGATGGATCAGCGACCGCGATGCCACCTTCGCCCAGCGCC 687604 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 ||||||||||||| |||||||||||| ||||||| || ||||| |||| || | Sbjct 687603 TGGTGGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCGTCCATCTTCT 687544 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||| | | Sbjct 687543 GGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGCG 687484 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 ||||||| || || |||||| ||||| | || | | || | ||| | || | Sbjct 687483 ACGAGGGCCTCCACACCGACTTCGCCTGCCTCCTCTACTCCCACCTCAAGCACAGGCCCA 687424 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | || ||| | ||||| |||||||||| ||||| |||||||| ||||||| Sbjct 687423 GCAAGCAGCTCGTTCAGCAGATCATCACCGACGCCGTCGCGCTCGAGCAGGAGTTCCTCA 687364 Query 117282 CCGAAGCGCTGCCGGTGCGTC-TGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 |||| || || || |||| | |||| || | || || | | ||| ||| ||||| Sbjct 687363 CCGAGGCTCT-CCCCTGCGCCATGCTCGGCATGAA-CGCCACCCTCATGAAGCAGTACAT 687306 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCC 117399 |||||||||||||||||||||||| ||| || | | || |||| |||||| | | Sbjct 687305 CGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGCAACGACAAGGTCTACAAGTCCAC 687246 Query 117400 CAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 |||||| | ||||||||| | ||||||| ||| Sbjct 687245 CAACCCCTTCGACTTTATGGAGAACATCTCCCTGG 687211 Score = 183 bits (202), Expect = 3e-41 Identities = 219/294 (74%), Gaps = 5/294 (2%) Strand=Plus/Minus Query 116628 ACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGG 116687 |||| | || |||| |||||||| ||| |||||| || |||||||||| ||||||| Sbjct 688098 ACCCACAGATCTGGCAAATGTACAAGAAGCACGAGGCTTCCTTCTGGACCGCCGAGGAGA 688039 Query 116688 TGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATT 116744 | ||||| ||||||||| ||||||| | | | | |||| ||||||| | Sbjct 688038 TTGACCTCTCCAAGGACCTTCACGACTGGAACAACAAGCTCACCGACGACGAGCGGTTCT 687979 Query 116745 TCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGG 116804 ||||| ||| | || ||||| ||||||||| |||||||||||||||||||| || Sbjct 687978 TCATCTCCCACATCCTCGCCTTCTTCGCCGCCTCAGACGGCATCGTCAACGAGAACCTCA 687919 Query 116805 TCGAGCGTTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAG 116863 ||||| | ||| || | | |||| ||| | ||||||| || |||||||||||||| ||| Sbjct 687918 TCGAGAGGTTCAGCGCCG-AGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGCTTCCAG 687860 Query 116864 ATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||| || |||||| | ||||| || | ||| || |||||||||||| ||| Sbjct 687859 ATCATGATTGAGAACATCCACTCCGAGACGTACTCTCTCCTCATCGACACATAC 687806 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| | || ||||| || |||||| | Sbjct 5085634 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATC 5085575 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || || | ||||| |||||||||||| | || || || || ||| Sbjct 5085574 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAACAGCGCCTC 5085515 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| ||||| ||||| || |||| || ||||| ||||||||||| |||||| Sbjct 5085514 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCTGACTACAACATTCAGAAG 5085455 Query 40879 G 40879 | Sbjct 5085454 G 5085454 >seq1 Length=7551078 Score = 158 bits (174), Expect = 1e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| ||||||||| |||| ||||| || | Sbjct 7246549 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 7246608 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || || | ||||| |||||||||||| | || ||| Sbjct 7246609 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 7246668 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| ||||| || |||| ||||||||| |||||||||| Sbjct 7246669 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 7246728 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| | || || || || ||| |||| Sbjct 7246729 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCG 7246763 >seq5 Length=3107351 Score = 150 bits (166), Expect = 2e-31 Identities = 161/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| ||||||||| | || |||||| || | Sbjct 1010226 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCG 1010167 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||| ||| |||| || Sbjct 1010166 GACACCATCGACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCA 1010108 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || |||||||| |||| ||||| ||| || ||||| Sbjct 1010107 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAA 1010048 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| ||| || || || || Sbjct 1010047 CATCCAGAAGGAGAGCACTCTCCACCTCGT 1010018 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || || || || ||||| | || || ||| || | Sbjct 1009998 ATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCA 1009939 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| ||||||| ||||| ||||| || ||| |||| || Sbjct 1009938 GATACCATCGATAACG-TGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATCA 1009880 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || |||| |||||||||| || ||||| Sbjct 1009879 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACAA 1009820 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||||||||| || Sbjct 1009819 CATCCAGAAGGAGTCGACGCTGCATCTCGT 1009790 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40696 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGC 40755 ||| |||| || || || || ||||| ||||||||| |||| ||||| || |||||| Sbjct 1010448 ATAGTCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACG 1010389 Query 40756 GTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACG 40814 | | |||| ||||| || || | || || |||||||| || | |||||||| || Sbjct 1010388 ATCGACAACG-TCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCG 1010330 Query 40815 ACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 40874 || |||| || ||||| || || || |||| || ||||| ||||||||||||||| Sbjct 1010329 CCTGATCTTTGCTGGCAAGCAACTTGAAGACGGCCGGACCCTGTCCGACTACAACATCCA 1010270 Query 40875 GAAGGAGGCCACGCTGCATCTAGT 40898 ||||||| |||| || || || || Sbjct 1010269 GAAGGAGTCCACCCTTCACCTCGT 1010246 Score = 113 bits (124), Expect = 5e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||| ||||| ||||||||| |||| || || | | || | | | | | ||||| Sbjct 1010741 TCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGT 1010682 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || |||| ||||| ||||||||||| | |||||||| || || || | ||| |||| Sbjct 1010681 CGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 1010622 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || |||| || ||||| |||||||||||| ||||||||| | || || | Sbjct 1010621 AGCAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTC 1010562 Query 40892 ATCTAGT 40898 |||| || Sbjct 1010561 ATCTTGT 1010555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219090515920