Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 3e-27
seq5 123 2e-23
seq2 98.7 9e-16
>seq1
Length=7551078
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| ||||| | | || ||| | ||||| || ||||| || || |||||||| |||
Sbjct 7246776 ACCACCGCGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 7246717
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| ||||| ||||||||||| || || ||| |||| || |||||||||||||| ||
Sbjct 7246716 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGG 7246657
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|||||||||||||| || || || || | |||| ||||||| | ||||||
Sbjct 7246656 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGAC 7246597
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
||||| ||| | || ||||| || || || || || || ||||||||||
Sbjct 7246596 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGG 7246547
>seq5
Length=3107351
Score = 123 bits (136), Expect = 2e-23
Identities = 143/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || ||||||||||| | ||||| ||||| ||||| ||||| ||| |
Sbjct 1010035 CTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAA 1010094
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
|||||||||||||||||| || || ||||||||||||||| || || || || |
Sbjct 1010095 GATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTT 1010154
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
|||| |||||||| | ||||| || | ||| | || |||||||| ||||| || ||
Sbjct 1010155 GTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGGTGAGAGTCTTGAC 1010214
Query 118727 AAAAATCTGCATG 118739
|| || ||||||
Sbjct 1010215 GAAGATTTGCATG 1010227
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || ||||||||||| | |||||| ||||| ||||| |||||
Sbjct 1009802 GTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTTCCG 1009861
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| ||||||||||||||||||| || || || ||||||||||| |||||| ||
Sbjct 1009862 GCGAAGATGAGACGCTGCTGATCCGGGGGAATACCCTCCTTGTCCTGAATTTTGCTCTTC 1009921
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | | || ||||| | || | || || || |||| ||
Sbjct 1009922 ACGTTATCGATGGTATCTGAGGATTCCACCTCCAGCGTGATAGTCTTCCCAGTCAACGTC 1009981
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 1009982 TTCACGAAGATCTGCATG 1009999
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || ||||||||||| ||| || || || ||||| ||||| || ||
Sbjct 1010567 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCG 1010626
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || || |||||||| ||||| || |||||||||||||| ||| || ||
Sbjct 1010627 GCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 1010686
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| | |||| ||| |||| ||| ||||||| ||| | || ||||||||
Sbjct 1010687 ACATTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 1010739
Score = 86.0 bits (94), Expect = 5e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| ||| || || || || || || || || |||
Sbjct 1010258 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCTTCAAGTTGCTTGCCA 1010317
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || |||||||| || ||||| ||||||||||| || || || ||
Sbjct 1010318 GCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTG 1010377
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | | ||||||||||| ||| | || |||||||| || ||
Sbjct 1010378 ACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTC 1010437
Query 118722 TTTAC 118726
|| ||
Sbjct 1010438 TTGAC 1010442
>seq2
Length=6127077
Score = 98.7 bits (108), Expect = 9e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 118543 TAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAG 118602
|| || | || ||||||||||| || | || || ||||||||||| || ||||
Sbjct 5085448 TACACACCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAG 5085507
Query 118603 CGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAA 118662
|| ||||||| ||||| |||||||| || |||||||||||||| || || || |
Sbjct 5085508 CGAAGATGAGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCA 5085567
Query 118663 CCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTT 118722
| | |||| ||||| | | ||||||||| | ||| | || ||||| ||||| || |
Sbjct 5085568 CATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCT 5085627
Query 118723 TTACAAA 118729
| || ||
Sbjct 5085628 TCACGAA 5085634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830310115764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |