Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq5 140 2e-28 seq1 134 9e-27 seq2 113 3e-20 >seq5 Length=3107351 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| || | || || ||||| | ||| || || ||||| |||||||| || || Sbjct 1010000 CCGCCGCGGAGACGAAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 1010059 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| |||| |||||| || ||||| ||||| |||||||| || ||| Sbjct 1010060 AGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1010119 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | || | || | |||||||| Sbjct 1010120 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACT 1010179 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||||||||| || || ||||| ||||| Sbjct 1010180 TCTAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1010226 Score = 111 bits (122), Expect = 1e-19 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||||||||| || |||| || | ||||||||| |||||| Sbjct 1010573 TCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCGAAA 1010632 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | || ||||||||| ||||| ||| | || | Sbjct 1010633 ATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTG 1010692 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367 | || | ||| | ||| || || || | |||||||| |||||||||| Sbjct 1010693 TCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGA 1010741 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/231 (70%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 |||||||| |||| || || || || | || || ||||| |||||||| || || Sbjct 1009772 CCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 1009831 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || ||||| ||||| |||||||| || ||| Sbjct 1009832 AGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1009891 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGA----ATCGGTCGATTC 34338 | | ||||||||| || ||||||| | | | |||||| ||| | ||||| Sbjct 1009892 ATACCCTCCTTGTC--CTGAATTTTGCTCTTCAC--GTTATCGATGGTATCTGAGGATTC 1009947 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||| |||||| || || || || | || ||||| ||||||||||| Sbjct 1009948 CACCTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | || || ||||| ||||||||||||||| Sbjct 1010228 CCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1010287 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | |||||||| || || || || ||||||||||| || Sbjct 1010288 AGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGA 1010347 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | | |||| |||| || ||||| Sbjct 1010348 ATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACC 1010407 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 || | |||||||| |||||||| || || || || Sbjct 1010408 TCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGAC 1010442 >seq1 Length=7551078 Score = 134 bits (148), Expect = 9e-27 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || |||||||| | |||||| ||||| | || || ||||| |||||||||||||| Sbjct 7246775 CCACCGCGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 7246716 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||||||||| ||||| || || |||||||| ||| ||| Sbjct 7246715 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGG 7246656 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | || ||||| Sbjct 7246655 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACC 7246596 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| || || || ||||||||||| Sbjct 7246595 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549 >seq2 Length=6127077 Score = 113 bits (124), Expect = 3e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 ||||| ||||||||||| || || |||| |||| || | ||||||||| ||||| ||| Sbjct 5085456 TTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATG 5085515 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || ||||| || ||| ||| | || ||||||||| ||||| ||| | || | | Sbjct 5085516 AGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 5085575 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 |||| |||| || ||||| || | |||||||| ||||| || || || ||||| ||| Sbjct 5085576 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAG 5085635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071933063520