Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 102 2e-16 seq2 100 6e-16 >seq1 Length=7551078 Score = 102 bits (112), Expect = 2e-16 Identities = 258/387 (67%), Gaps = 18/387 (5%) Strand=Plus/Plus Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070 |||| ||| |||| || || ||||| || |||||||| || ||||| || || ||| | Sbjct 5530258 TGCTCTTCTACGGACCCCCGGGAACCGGAAAGACGTCGACGATCCTCGCCCTCGCCAGGG 5530317 Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130 || | || | || || | | ||| || |||||||| ||||| || ||||| | Sbjct 5530318 AACTCTACGGACCCGAGATGATCAAATCGCGTGTTCTCGAGCTCAACGCCTCCGACGAGC 5530377 Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAA-GACTTT-CTC-CA---AGATGTCGATTT 254184 | || | | ||||||| || ||| |||| || ||| | | || || | ||| Sbjct 5530378 GTGGCATCTCCATCGTCCGGGAGAAGGTCAAAGATTTTGCGCGCATGCAGCTCACGAACC 5530437 Query 254185 CGTCGTTC-----CAA--CCCGG-----CTGTCCGCCTTTCAAGCTCGTGATCCTGGACG 254232 | || | ||| |||| ||| ||||| |||||| | | ||||| |||| Sbjct 5530438 CCCCGCCCGGCTACAAGTCCCGCTACCCCTGCCCGCCCTTCAAGATTATCATCCTCGACG 5530497 Query 254233 AGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACT 254292 |||| ||| ||||||| ||||| ||| ||| || ||||| || ||||||||| || Sbjct 5530498 AGGCCGACTCCATGACCCAGGACGCCCAGAGCGCGCTGCGCCGCACCATGGAGACGTACA 5530557 Query 254293 CCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGG 254352 | | || ||||| ||||| | ||||||||||| | ||||||| ||| || | Sbjct 5530558 GCAAAATCACCCGTTTCTGCCTCATCTGCAACTACGTCACCCGCATCATCGACCCCCTCG 5530617 Query 254353 CTTCTCGGTGCGCCAAGTTTCGATTCA 254379 | ||||| |||||| || |||| Sbjct 5530618 CGAGCAGGTGCAGCAAGTTCCGCTTCA 5530644 >seq2 Length=6127077 Score = 100 bits (110), Expect = 6e-16 Identities = 258/388 (66%), Gaps = 19/388 (5%) Strand=Plus/Minus Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076 || |||| || ||||| || ||||||||||| |||||||| || || || || | | | Sbjct 2619910 TCTACGGGCCGCCCGGCACGGGCAAGACGTCCACCATCCTCGCCCTCGCGCGGCACATCT 2619851 Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136 |||| | ||||| | || || |||||||| ||||| || ||||| ||||| Sbjct 2619850 ACGGCGCCGAGAACACACGCCAGATGGTCCTCGAGCTCAACGCCTCGGACGACCGCGGCA 2619791 Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTCTCC------AAG------ATGTCGATTT 254184 | ||||| || ||||| |||| ||||| ||| || ||| | || || Sbjct 2619790 TCGACGTGGTGCGCGAGCAGATAAAGACGTTCGCCTCGACGAAGCAAATCTTCTCCATGG 2619731 Query 254185 CGTCGT--TCCAACCCGGCTGTCCGCC--TTTCAAGCTCGTGATCCTGGACGAGGCGGAC 254240 | |||| ||||| || | ||||| ||||||||| | ||||| || ||||||||| Sbjct 2619730 CCTCGTCATCCAAGGGCGC-GGCCGCCGGGTTCAAGCTCATCATCCTCGATGAGGCGGAC 2619672 Query 254241 ACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTG 254300 ||||||| | |||||| ||||| || || | ||||||| | || | | Sbjct 2619671 GCCATGACCAACACGGCGCAGATGGCCCTGCGGCGCATCATGGAGAAGTACACGGCCAAC 2619612 Query 254301 ACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCC-CGCTGGCTTCTCG 254359 ||||| || ||| | | ||||||| | ||| || || ||| |||| || || Sbjct 2619611 ACGCGCTTCTGCATCATCGCCAACTACTCGCACAAGCTC-TCACCCGCGCTACTGTCGCG 2619553 Query 254360 GTGCGCCAAGTTTCGATTCAGCACCCTC 254387 |||| | ||| || |||||| | ||| Sbjct 2619552 GTGCACGCGGTTCCGGTTCAGCCCGCTC 2619525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766166120256