Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 seq1 89.7 5e-13 >seq5 Length=3107351 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || | ||| | || | ||||| || ||||| || || ||||| || ||| Sbjct 1010227 GCCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 1010286 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || | |||||| || || || |||||| ||||||| || ||||| || ||||| Sbjct 1010287 CAGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGG 1010346 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || || || ||| || || | | || | ||||||| || ||| || Sbjct 1010347 AATGCCCTCCTTATCCTGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGAC 1010406 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATAT 139758 ||| | ||| | ||||||||||| | || || |||| ||| Sbjct 1010407 CTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGACTAT 1010448 >seq1 Length=7551078 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||| || | ||| | || ||||| || || ||||| || ||| Sbjct 7246775 CCACCGCGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 7246716 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || ||||||| || ||||||||||| || Sbjct 7246715 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGG 7246656 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| || ||||| ||| || || | | || | ||||| | || ||| ||| Sbjct 7246655 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACC 7246596 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||| || | || || ||||| || ||||| Sbjct 7246595 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063894586400