Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2 187 4e-42 >seq2 Length=6127077 Score = 187 bits (206), Expect = 4e-42 Identities = 464/699 (66%), Gaps = 14/699 (2%) Strand=Plus/Plus Query 79891 CCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATA 79950 || ||||| |||| || ||||||| | ||| || |||| | || ||||| ||||| Sbjct 2153404 CCGGGACACTCGTTGGGGCACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATG 2153463 Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 |||||||| || ||||| || || | || ||||| | || | | |||||| || || Sbjct 2153464 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCG 2153523 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 |||||| || || ||||| | | | ||||| ||||||||| |||| || ||| Sbjct 2153524 TGATTCTTGCGGAGGTCCAGGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATG 2153583 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | || || || ||||| || |||||||| | |||| |||||||| || | Sbjct 2153584 GCAAAGGCGCCAGGGCGCTTGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAG 2153643 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 80190 || | | ||| || || ||||| || || ||||| ||||| |||| ||| || || Sbjct 2153644 ACGCGGAGCATGGGGATGATACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCG 2153703 Query 80191 CTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 |||| ||||| | |||| | || || || |||||||| || ||||| | | Sbjct 2153704 GTGGCGCGAATGCGGTGGACGTTGA--GGCCAATGCCACCTGCCATCTTGGAGATCATGG 2153761 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 |||| || | ||||| ||||||||||| ||||| ||||| |||| | | || | Sbjct 2153762 CGCAAGTCTTGAGGGTATCGTAGATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGA 2153821 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || ||| | || || ||| || || || || | || || || ||||| | Sbjct 2153822 AGCAAGAAGAGAGCTGCGCCTGAGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGG 2153881 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT----AGCT-GATTCTATATCCCA 80423 |||| | || |||| || ||||| |||||||| ||| || | | |||| Sbjct 2153882 TAAAGAACTTGGACGACATGAGGTTGTAGGTCTCAATGACACGCTCGACGTTGTCTCCC- 2153940 Query 80424 TTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 80483 |||| || || ||||||||||| | ||||||||| || | || ||||||||| Sbjct 2153941 CAGATG----CCCACGGCGACACGCATAATCATGTGCTGGGGCCGCTCGACGATCTTGCC 2153996 Query 80484 ATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 80543 || | || | | ||| || || | || || || ||||| || | ||| || Sbjct 2153997 ATCGAGCTTGAGGAGGTATGACCGCTCGAGCGTCTTGAACCCAAAGTACTGGTAGTTGAA 2154056 Query 80544 GTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 80582 ||||| || || | ||| | |||| ||| | ||||| Sbjct 2154057 GTCTCTGTCATAGAGAATGGCGGAGTCGAGCTCCTCCTT 2154095 Score = 96.9 bits (106), Expect = 5e-15 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||| || |||||||| | || || |||||||| || || || Sbjct 687456 CAGGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTCAGG 687515 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| ||||| ||||| || ||||| || |||||||| || | || |||||| Sbjct 687516 CCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGCACCGCTGAAGAAG 687575 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC---GCTGTCATGT 50136 || || || || ||||| ||||| || || | || | | |||| || ||| Sbjct 687576 ATGCCCTCGACGGCGGCGAAGGCCACCAGGCGCTGGGCGAAGGTGGCATCGCGGTCGCTG 687635 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||||| ||||||| ||||||||||| Sbjct 687636 ATCCATCGGAGAGCCCAGTCGGCCTTCTT 687664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268647367880