Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq2 176 6e-39
>seq2
Length=6127077
Score = 176 bits (194), Expect = 6e-39
Identities = 401/598 (67%), Gaps = 14/598 (2%)
Strand=Plus/Plus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
|| ||||| || || || ||||||| | ||| || |||| | | ||||| |||||
Sbjct 2153404 CCGGGACACTCGTTGGGGCACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATG 2153463
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
|||||||| || ||||| || || | || ||||| | || | | |||||| || ||
Sbjct 2153464 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCG 2153523
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
|||||| || || ||||| | | | ||||| ||||||||| |||| || |||
Sbjct 2153524 TGATTCTTGCGGAGGTCCAGGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATG 2153583
Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213
|| | | || || || ||||| || |||||||| | |||| |||||||| || |
Sbjct 2153584 GCAAAGGCGCCAGGGCGCTTGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAG 2153643
Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273
|| | | ||| || || ||||| || || | ||| ||||| |||| ||| || ||
Sbjct 2153644 ACGCGGAGCATGGGGATGATACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCG 2153703
Query 72274 CTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331
|||| ||||| | | |||| | || || || |||||||| || ||||| | |
Sbjct 2153704 GTGGCGCGAATGCGGTGGACGTTGA--GGCCAATGCCACCTGCCATCTTGGAGATCATGG 2153761
Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391
|||| || | ||||| ||||||||||| || || |||||| |||| | | || |
Sbjct 2153762 CGCAAGTCTTGAGGGTATCGTAGATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGA 2153821
Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451
| || ||| | || || ||| || || || || | || || || ||||| |
Sbjct 2153822 AGCAAGAAGAGAGCTGCGCCTGAGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGG 2153881
Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT----AGCT-GATTCTATATCCCA 72506
|||| | || |||| || ||||| |||||||| ||| || | | ||||
Sbjct 2153882 TAAAGAACTTGGACGACATGAGGTTGTAGGTCTCAATGACACGCTCGACGTTGTCTCCC- 2153940
Query 72507 TTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564
|||| || || ||||||||||| | ||| ||||| || | || |||||||||
Sbjct 2153941 CAGATG----CCCACGGCGACACGCATAATCATGTGCTGGGGCCGCTCGACGATCTTG 2153994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139057382920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |