Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 176 6e-39 >seq2 Length=6127077 Score = 176 bits (194), Expect = 6e-39 Identities = 401/598 (67%), Gaps = 14/598 (2%) Strand=Plus/Plus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 || ||||| || || || ||||||| | ||| || |||| | | ||||| ||||| Sbjct 2153404 CCGGGACACTCGTTGGGGCACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATG 2153463 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 |||||||| || ||||| || || | || ||||| | || | | |||||| || || Sbjct 2153464 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCG 2153523 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 |||||| || || ||||| | | | ||||| ||||||||| |||| || ||| Sbjct 2153524 TGATTCTTGCGGAGGTCCAGGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATG 2153583 Query 72154 GCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 72213 || | | || || || ||||| || |||||||| | |||| |||||||| || | Sbjct 2153584 GCAAAGGCGCCAGGGCGCTTGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAG 2153643 Query 72214 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 72273 || | | ||| || || ||||| || || | ||| ||||| |||| ||| || || Sbjct 2153644 ACGCGGAGCATGGGGATGATACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCG 2153703 Query 72274 CTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 72331 |||| ||||| | | |||| | || || || |||||||| || ||||| | | Sbjct 2153704 GTGGCGCGAATGCGGTGGACGTTGA--GGCCAATGCCACCTGCCATCTTGGAGATCATGG 2153761 Query 72332 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 72391 |||| || | ||||| ||||||||||| || || |||||| |||| | | || | Sbjct 2153762 CGCAAGTCTTGAGGGTATCGTAGATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGA 2153821 Query 72392 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 72451 | || ||| | || || ||| || || || || | || || || ||||| | Sbjct 2153822 AGCAAGAAGAGAGCTGCGCCTGAGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGG 2153881 Query 72452 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT----AGCT-GATTCTATATCCCA 72506 |||| | || |||| || ||||| |||||||| ||| || | | |||| Sbjct 2153882 TAAAGAACTTGGACGACATGAGGTTGTAGGTCTCAATGACACGCTCGACGTTGTCTCCC- 2153940 Query 72507 TTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 |||| || || ||||||||||| | ||| ||||| || | || ||||||||| Sbjct 2153941 CAGATG----CCCACGGCGACACGCATAATCATGTGCTGGGGCCGCTCGACGATCTTG 2153994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139057382920