Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 150 3e-31 >seq2 Length=6127077 Score = 150 bits (166), Expect = 3e-31 Identities = 323/476 (68%), Gaps = 10/476 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 |||||||| || || || || ||||| | ||| |||| |||| || ||||| || || Sbjct 2153615 CAGGGCGGGAACAAGCGCCCTGGCGCCTTTGCCATCTATCTGGAGCCGTGGCATGCTGAT 2153556 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || ||||| || | || | ||||| || ||| || ||| || ||| | || Sbjct 2153555 GTCTTTGAATTCCTGGACCTCCGCAAGAATCACGGCAAGGAGGAGATTCGTGCCCGCGAT 2153496 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || |||||| | || ||| | ||||||||||| || | | |||| | Sbjct 2153495 CTCTTCCTCGCCCTCTGGATCCCCGATCTCTTCATGAAGCGAGTGGAGAAGAATGGCGAT 2153436 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||||||| || || ||||| || |||| |||| ||||| |||||| Sbjct 2153435 TGGACTCTGATGTGCCCCAACGAGTGTCCCGGCCTTGCCGACTGCTATGGCGATGAGTTT 2153376 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGATGCACG 97174 || ||| |||| | ||||| |||||||| || |||| | || | || | Sbjct 2153375 GAAGCCCTGTACGAGAAGTACGAAGCTGAGGGCCGCGGTCGCAAGAC-ACTCAAGGCTC- 2153318 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | |||||| | ||| ||| ||||| || | || | ||| |||| Sbjct 2153317 AGAAGCTCTGGTACGCCATCCTCGAGGCGCAGACCGAGACGGGGAACCCCTTCATGCTCT 2153258 Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT---CAAGGGCT 97290 |||||||| | || ||||| |||||||| ||||||||||||| ||| || Sbjct 2153257 ACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACCATTCGCAA---CT 2153201 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346 |||| || ||||| || ||||| |||||| | | || || ||| || |||||| Sbjct 2153200 CCAACCTCTGCACCGAGATTGTCGAGTACTGCGCGCCTGATGAGGTCGCTGTTTGC 2153145 Score = 141 bits (156), Expect = 1e-28 Identities = 304/449 (68%), Gaps = 19/449 (4%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 |||||||| ||||||||||| |||||||||||||| ||| || ||| ||||||| Sbjct 687604 CTGGTGGCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCGTCCATCTTC 687545 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||||||||||||||| ||||||||||| ||||| | |||||| | || || || Sbjct 687544 TGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGC 687485 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT-TTCGCAACTATCTGCGTCCCGA 125605 ||||||||||| ||| ||||| ||| || || | || || || | | Sbjct 687484 GACGAGGGCCTCCACACCGACTTCGCCTGCCTCCTCTACTCCCACCT----------CAA 687435 Query 125606 GTGCAGATCCAGCGATGA-AAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 | ||| ||||| | | | ||| | | || | ||||| ||||| | | || | Sbjct 687434 GCACAGGCCCAGCAAGCAGCTCGTTCAGC-AGATCATCACCGACGCCGTCGCGCTCGAGC 687376 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 | ||||| || ||||| | || || | |||| | ||||||||| || || ||| Sbjct 687375 AGGAGTTCCTCACCGAGGCTCTCCCCTGCGCCATGCTCGGCATGAACGCCACCCTCATGA 687316 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGA 125781 ||||||| ||||| || || || | || || || | ||| || |||| Sbjct 687315 AGCAGTACATCGAGTTCGTCGCCGACAGGCTGCT---CGTCGCCCTCGGCAACGACAAGG 687259 Query 125782 TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCA 125841 | ||||| ||| || ||||| || || ||| | ||| || || | || ||||||| Sbjct 687258 TCTACAAGTCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCA 687199 Query 125842 ACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 |||| ||||||||| ||| |||| ||| Sbjct 687198 ACTTCTTCGAGAAGCGCGTCGGCGACTAC 687170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059042524920