Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 2e-12
>seq1
Length=7551078
Score = 87.8 bits (96), Expect = 2e-12
Identities = 114/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 5330 AGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAACAGC 5389
||||| || |||| ||| |||| ||| |||||||||||||||| || ||| || ||
Sbjct 4924079 AGCTGGGCGATCCGGTCGCCCTCCTTGACCTCAAAGTCGCTGTCGGCGTGGTTGAAGAGG 4924138
Query 5390 ACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAG 5449
| ||| ||| | ||| |||||||| |||| || || || ||||| |||||| |||
Sbjct 4924139 AGAACCTTGACCTGGCCGCGGTAGTCGGCGTCAATCACACCCGCGCCGGTGTCGATGAAG 4924198
Query 5450 TGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCC 5487
| || || |||||||| || || || || || ||
Sbjct 4924199 TTCTTCGAGGCGAGGCCGGACCGGGGCGCGATTCGGCC 4924236
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447750304853040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |