Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 1e-14 >seq5 Length=3107351 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| || |||||| ||||||||||| || | || || ||||||| ||||| Sbjct 1010560 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTG 1010619 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || |||| | |||||||| || ||| | | ||||||||| ||| || Sbjct 1010620 CTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTT 1010679 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 | ||||| | | |||||||| | |||||| ||||| || ||||| || ||||| Sbjct 1010680 CGACTTGACATTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 1010739 Query 48703 GA 48704 || Sbjct 1010740 GA 1010741 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || || ||||||||||| || ||||||||||||| | || |||||||||||||| Sbjct 1010024 TGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGC 1010083 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || ||| || | || | ||||||||||||| || | | |||||||| || || Sbjct 1010084 TTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTG 1010143 Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 ||||| | | || ||||| || | || || || | || ||||| || |||| Sbjct 1010144 GACTTGACGTTGTCG--ATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGG 1010201 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||| || || || || ||||| Sbjct 1010202 TGAGAGTCTTGACGAAGATTTGCAT 1010226 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||| ||||| | || | || | ||| || || |||||| || ||||||||||| | Sbjct 1009771 ACCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGA 1009830 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | ||| ||||||| |||||||| ||| || | || | ||||||||||||| || Sbjct 1009831 GAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 1009890 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | || ||||||||| |||||| ||| | | |||||||| | || ||| Sbjct 1009891 AATACCCTCCTTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCAC 1009950 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||| | || || || || || || | || ||||| || |||||||| Sbjct 1009951 CTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251112722017