Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq5 95.1 1e-14
>seq5
Length=3107351
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582
|||||| || |||||| ||||||||||| || | || || ||||||| |||||
Sbjct 1010560 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTG 1010619
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| || |||| | |||||||| || ||| | | ||||||||| ||| ||
Sbjct 1010620 CTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTT 1010679
Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702
| ||||| | | |||||||| | |||||| ||||| || ||||| || |||||
Sbjct 1010680 CGACTTGACATTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 1010739
Query 48703 GA 48704
||
Sbjct 1010740 GA 1010741
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||||||||||| || ||||||||||||| | || ||||||||||||||
Sbjct 1010024 TGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGC 1010083
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| || | || | ||||||||||||| || | | |||||||| || ||
Sbjct 1010084 TTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTG 1010143
Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
||||| | | || ||||| || | || || || | || ||||| || ||||
Sbjct 1010144 GACTTGACGTTGTCG--ATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGG 1010201
Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726
||||||| || || || || |||||
Sbjct 1010202 TGAGAGTCTTGACGAAGATTTGCAT 1010226
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| ||||| | || | || | ||| || || |||||| || ||||||||||| |
Sbjct 1009771 ACCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGA 1009830
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
| ||| ||||||| |||||||| ||| || | || | ||||||||||||| ||
Sbjct 1009831 GAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 1009890
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || ||||||||| |||||| ||| | | |||||||| | || |||
Sbjct 1009891 AATACCCTCCTTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCAC 1009950
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || || || || || || | || ||||| || ||||||||
Sbjct 1009951 CTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251112722017
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |