Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_005946.1
Length=105903
Score E
Sequences producing significant alignments: (Bits) Value
seq4 84.2 1e-11
>seq4
Length=3495652
Score = 84.2 bits (92), Expect = 1e-11
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTC-CTT 71477
||||| | |||||| | |||||| ||||| || |||| ||| || || | || || |
Sbjct 457473 GTCATTCGGGAGGGGATGGCGTGCGGGTTAATAATGATGTCCGGAACGATGCCCTCGCGC 457414
Query 71478 GTCGAAGGGCATGTCCTCCTG--GGTCAGGACAGCTCCGCATGTCCCCTTTTGCGCCGT- 71534
|| |||||||||||||||||| ||| | | || | ||| || ||||||||| ||||
Sbjct 457413 GT-GAAGGGCATGTCCTCCTGCCGGT-ACGTCA-CGCCGATCGTGCCCTTTTGC-CCGTG 457358
Query 71535 GAATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTGAC 71594
| ||||| ||||||||||| |||| ||| ||| ||||| | | || |||||
Sbjct 457357 GCGCGACGCGAACTTGTCGCCAATCTGCGGGATTTTGGTCGTCCTGACGCGGACTTTGAC 457298
Query 71595 GAGCTTCTTGCCATC 71609
| |||| |||| ||
Sbjct 457297 GTACTTCATGCCGTC 457283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338764729812168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |