Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 104 4e-18 seq5 80.6 4e-11 >seq3 Length=5489246 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || || |||||||| || || Sbjct 3444542 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 3444600 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||||||||| || ||||||||||| ||||||||| |||| Sbjct 3444601 CCGTCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTC 3444639 Score = 80.6 bits (88), Expect = 4e-11 Identities = 112/157 (71%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| || |||| || | || | ||| ||||||| || || |||| ||| | Sbjct 3444728 TGATCTACGAGGAGACCCGCGTGGTCCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGACG 3444787 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||| ||||||||||| || || ||||| ||||||||| | || ||||||| | Sbjct 3444788 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACCTCCCTCGACGTCGTCTACG 3444847 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | | || || |||||||||| | || ||||| || Sbjct 3444848 CGCTCAAGCGCCAAGGCCGTACCCTCTACGGTTTCGG 3444884 >seq5 Length=3107351 Score = 80.6 bits (88), Expect = 4e-11 Identities = 80/101 (79%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||||| | || || |||||||| || ||||||||||| || || Sbjct 1610463 GCCAAGCGTCACAGGAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCGAT 1610521 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | | | |||| ||||||||||| ||||||||| |||||| Sbjct 1610522 CAGGAGGTTGGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 1610562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075184456781