Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 4e-18
seq5 80.6 4e-11
>seq3
Length=5489246
Score = 104 bits (114), Expect = 4e-18
Identities = 84/99 (85%), Gaps = 2/99 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| || ||
Sbjct 3444542 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCCAT 3444600
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
||||||||| || ||||||||||| ||||||||| ||||
Sbjct 3444601 CCGTCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTC 3444639
Score = 80.6 bits (88), Expect = 4e-11
Identities = 112/157 (71%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| || |||| || | || | ||| ||||||| || || |||| ||| |
Sbjct 3444728 TGATCTACGAGGAGACCCGCGTGGTCCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGACG 3444787
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||| ||||||||| | || ||||||| |
Sbjct 3444788 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACCTCCCTCGACGTCGTCTACG 3444847
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
| | || || |||||||||| | || ||||| ||
Sbjct 3444848 CGCTCAAGCGCCAAGGCCGTACCCTCTACGGTTTCGG 3444884
>seq5
Length=3107351
Score = 80.6 bits (88), Expect = 4e-11
Identities = 80/101 (79%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||||| | || || |||||||| || ||||||||||| || ||
Sbjct 1610463 GCCAAGCGTCACAGGAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCCGCGAT 1610521
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| | | |||| ||||||||||| ||||||||| ||||||
Sbjct 1610522 CAGGAGGTTGGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 1610562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075184456781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |