Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 1e-24
>seq3
Length=5489246
Score = 127 bits (140), Expect = 1e-24
Identities = 204/293 (70%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254
|| || ||||| |||||||| ||| | | ||| | ||| ||||||| ||||||||
Sbjct 3144579 GATGCCTTCTATCGCTACAAGATGGAGAGGATCCAGACTAAGATCGAGGGCAAGGGAAAT 3144638
Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314
|| || || ||||| |||||||| || |||||| || |||| ||||| |
Sbjct 3144639 GGCATCAAGACCGTTGTTGTCAACCTGAGCAGCGTCGCTCAGTCGCTTTCCCGCCCCGGA 3144698
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
||||| | || || ||||| | ||| |||||||| ||||| | | |||| |
Sbjct 3144699 TCCTACGTCATCAAGTACTTCGGCTTCGAGCTTGGCGCCCAGACCAACATCGATCCCGCC 3144758
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| |||| ||| | ||||| | || | |||||||||||||||| | ||||||
Sbjct 3144759 GACGACCGCTGGATCATCAACGGTGCCCACGATGCTGCCAAGCTGCAGGAGTACCTTGAC 3144818
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || || ||| || || || | ||||| | ||||| ||||||||
Sbjct 3144819 GGCTTCATCAACAGGTTCGTTCTCTGCAAGAAATGCAAGAACCCCGAGACCGA 3144871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947130603127
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |