Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 4e-13 seq1 82.4 7e-11 >seq5 Length=3107351 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/191 (72%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAG- 25079 ||||| || ||||||| |||| ||||||||||| || || ||||| || || ||| Sbjct 1010739 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGA--CAATGTCAAGT 1010682 Query 25080 CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGC 25139 | || | ||| ||||| || || || || || ||||| ||||| | ||||| |||||| Sbjct 1010681 CGAAGATTCA-GGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGC 1010623 Query 25140 AAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTA 25199 || || | || || | ||| || || ||| ||||| ||||| || || || || || Sbjct 1010622 AAGCAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTT 1010563 Query 25200 CATTTAGTGCT 25210 ||| | || || Sbjct 1010562 CATCTTGTTCT 1010552 >seq1 Length=7551078 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/221 (69%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 24992 CGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051 || ||| ||||| || || || ||||| | || || || ||||||| |||| || || Sbjct 7246542 CGCAACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGA 7246601 Query 25052 GTCGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109 ||| || ||||||||||| || || ||| || ||| ||||| || || || || Sbjct 7246602 GTCCTCGGACACTATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCC 7246659 Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169 || || || ||||| | || || |||||||| || | || || | ||||| | | Sbjct 7246660 CCCGATCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCC 7246719 Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || || || || || | ||||| Sbjct 7246720 GACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGTGCT 7246760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855