Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 89.7 4e-13
seq1 82.4 7e-11
>seq5
Length=3107351
Score = 89.7 bits (98), Expect = 4e-13
Identities = 137/191 (72%), Gaps = 6/191 (3%)
Strand=Plus/Minus
Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAG- 25079
||||| || ||||||| |||| ||||||||||| || || ||||| || || |||
Sbjct 1010739 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGA--CAATGTCAAGT 1010682
Query 25080 CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGC 25139
| || | ||| ||||| || || || || || ||||| ||||| | ||||| ||||||
Sbjct 1010681 CGAAGATTCA-GGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGC 1010623
Query 25140 AAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTA 25199
|| || | || || | ||| || || ||| ||||| ||||| || || || || ||
Sbjct 1010622 AAGCAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTT 1010563
Query 25200 CATTTAGTGCT 25210
||| | || ||
Sbjct 1010562 CATCTTGTTCT 1010552
>seq1
Length=7551078
Score = 82.4 bits (90), Expect = 7e-11
Identities = 152/221 (69%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 24992 CGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGA 25051
|| ||| ||||| || || || ||||| | || || || ||||||| |||| || ||
Sbjct 7246542 CGCAACCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGA 7246601
Query 25052 GTCGTCTGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCA 25109
||| || ||||||||||| || || ||| || ||| ||||| || || || ||
Sbjct 7246602 GTCCTCGGACACTATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCC 7246659
Query 25110 CCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGC 25169
|| || || ||||| | || || |||||||| || | || || | ||||| | |
Sbjct 7246660 CCCGATCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCC 7246719
Query 25170 GATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || || || || || | |||||
Sbjct 7246720 GACTACAACATCCAGAAGGAGTCGACCCTCCACCTCGTGCT 7246760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327910219855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |