Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5 123 2e-23 seq1 114 1e-20 seq2 89.7 4e-13 >seq5 Length=3107351 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| || || |||||| || | Sbjct 1009998 ATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCA 1009939 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | | || |||||||| ||||||||||||||||| || ||||| Sbjct 1009938 GATACCATCGATAACGTGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATCAG 1009879 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | ||||| |||||| |||| ||||||||| Sbjct 1009878 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACAAC 1009819 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | ||| | || | || | ||||| ||| Sbjct 1009818 ATCCAGAAGGAGTCGACGCTGCATCTCGTCCTTCGGCTTCGCGGCGGT 1009771 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| || || |||| || ||||| ||| || | Sbjct 1010226 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCG 1010167 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || |||||||||||||| ||||| || ||||| Sbjct 1010166 GACACCATCGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCAG 1010107 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | ||||| |||||| |||| ||||||||| Sbjct 1010106 CAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAAC 1010047 Query 22399 ATTCAAAAAGA 22409 || || || || Sbjct 1010046 ATCCAGAAGGA 1010036 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| || || ||||| | | |||||| | ||| || |||| Sbjct 1010739 ACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGTCG 1010680 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || ||||| || || || || || || |||||||| Sbjct 1010679 AAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 1010620 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | ||||| || ||| | ||||| ||||||||||| || || || ||| | ||| Sbjct 1010619 CAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTCAT 1010560 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | ||| | || | || || ||| Sbjct 1010559 CTTGTTCTCCGCCTTCGTGGTGGT 1010536 >seq1 Length=7551078 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || || | Sbjct 7246549 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 7246608 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| || || || ||||||||||| || || |||||||| Sbjct 7246609 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 7246668 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||||| ||||||| |||||| Sbjct 7246669 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 7246728 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | || | || |||| ||||||| ||| Sbjct 7246729 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCGTCTGCGCGGTGGT 7246776 >seq2 Length=6127077 Score = 89.7 bits (98), Expect = 4e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || || |||| || | ||| || | || Sbjct 5085619 ACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATCGACAATGTGAAGTCC 5085560 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||||||||| || || || || || ||||| Sbjct 5085559 AAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAACAGCGCCTCATCTTCGCTGGCAAG 5085500 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | ||||| ||| ||| | || || ||||||||||| || Sbjct 5085499 CAGCTCGAGGACGGCCGTACCCTTTCTGACTACAACATTCAGAA 5085456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727913037605