Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 149 1e-30 seq1 111 3e-19 seq3 93.3 9e-14 >seq2 Length=6127077 Score = 149 bits (164), Expect = 1e-30 Identities = 889/1412 (63%), Gaps = 40/1412 (3%) Strand=Plus/Plus Query 293115 CTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGA 293174 ||| | ||| || | ||||| || ||||||||||| | | || || || | ||| Sbjct 2152356 CTGGGACTGGTCAATGAAGGCGCCGCGATCAGCAGCCATCTGGATAACCGTGCGCTGAGA 2152415 Query 293175 GATCTCCCACGATGTCTTGTACACTGCCTTGA---CATCAGGATGAATGCCAATAACCTT 293231 ||||||||| ||||| |||| || ||||| | || || | || || || Sbjct 2152416 GATCTCCCAGACGGTCTTATACAGTGTCTTGATGTCGTCTGGGAGGTTGGGGATG---TT 2152472 Query 293232 CTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGTCCCACG 293291 |||||| || || |||| |||||| || | |||||||| | |||||||| ||| | Sbjct 2152473 CTGGATCGAGCCGCCGTCGGCAATGATGCGATTCTTCATACTATCGGACCATAGGCCAAG 2152532 Query 293292 AGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCG 293351 | | ||| || | || || | | |||||| || |||| |||||||| || ||| Sbjct 2152533 GTCGACGAGATCCCTGAGCAGCCAGGGGTTGACGACTTGGAATTCACCAGCCAGCACGCG 2152592 Query 293352 ACGGCTGTAAATGTTCGAAGTGATGGGTTCGGCTGCCTCAACAGACCCGCAAATCTGAGC 293411 || ||| ||||| || ||| || ||| ||| ||| ||||| | Sbjct 2152593 TCGTTGGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGTTTCCGAGGATCTGGGA 2152652 Query 293412 AGTAGATGCGGTAGGCATAAGAGCAGTCGTCAGAGAGTTCCTCACACC---CTTCTTGAC 293468 || ||| || |||||| |||| | |||| ||||| ||||| || ||||| Sbjct 2152653 CGTGCTTGCCGTGGGCATAGGAGCGAGCAGCAGACTGTTCCGTACACCATGCTGCTTGAT 2152712 Query 293469 ACGCGATTCGAGACCCGCCCAGTCC-AGAGCAGTCTGAGGTGTA-ACACCCCAGAGATGA 293526 ||| | || |||||||| |||| ||| |||| | || ||| | | Sbjct 2152713 TTGCGCCTTCAGCGTGTCCCAGTCCCAGAG--GTCGGAGGGCTTGACGTTCCACATGTCG 2152770 Query 293527 TACTGCATGATACCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCA 293586 || || | |||| | | |||| || ||||| |||| | | ||||| | | | Sbjct 2152771 TATTGAAGCTCTCCCTGGGAGACAGGCGAACCCTCGTAGGTCGAGTAAGGGCCCTCCACC 2152830 Query 293587 TCAGAGAGCTCGCAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGG 293646 | | |||||| || ||||||| ||||| ||||||| ||||||||||| | Sbjct 2152831 TTGGCGAGCTCCATGGAGGCCTCAAGGGCAGCGTGGTAAATGGTCTCGAAGATCTGCTTG 2152890 Query 293647 TTGAGCTTGCGAGCCTGCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTGC 293706 || |||| ||||||| ||| || || ||||| || || |||| | ||| Sbjct 2152891 TTCAGCTCACGAGCCTCGGGAGACTCGAAGGGCATACGAAGAGCGAGGAACGCGTCCGCA 2152950 Query 293707 AGACCCTGTACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGA 293766 || ||||| ||||| || |||| ||||| ||||| ||||||| || |||||| Sbjct 2152951 AGCCCCTGGACACCGACGCCAATCGGGCGGTGACGCATGTTGCTGTTCCGTGCCTCCTCG 2153010 Query 293767 ACCGCATATGCCATCACATCAATGCTCCTGTCCAGGTTCTTCGTGAGAACCTTGACATGC 293826 | | || | ||||| | | |||||| ||||||| | || ||||||| | Sbjct 2153011 ATGGGGTAATGGTTGACATCGACGATCCTGTTCAGGTTCCGCACGACAACCTTGGTGACC 2153070 Query 293827 TTGCGGAGGTCCTCAAAGTCAAATGCATCATTCTTGACATAGTTCT-TGAGCACGATGCT 293885 | | |||| | ||||||||| || || | || ||| || | | | || | || Sbjct 2153071 TCGTGGAGCTTCTCAAAGTCGAAGACACCCTTGTTGTAATCGATGTAAGAAGGCAGCGCA 2153130 Query 293886 ACCGATGACA-----CACACTGCAGTCTCCTCCTTCGAGGTGTACTCGACAATCTCAGCA 293940 | || | || || || || ||| || || | ||||||||||||||| | Sbjct 2153131 AGGGAGGCCAAGTTGCAAACAGCGACCTCATCAGGCGCGCAGTACTCGACAATCTCGGTG 2153190 Query 293941 CAGAGGTTACTGCCCTTG---ATGGTGCCCGCATTAGACTGCATGTTCTTGGCATTGACA 293997 ||||||| || ||| ||||||||| || ||| || ||||| ||| || Sbjct 2153191 CAGAGGT---TGGAGTTGCGAATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTG-CA 2153246 Query 293998 CTG-TCTTTGTTGAGGACATATGGCATACCCGTTTCAATCTGAGTGGTGACCATGGTGTT 294056 || || |||| ||| | | || | ||||| || |||| | || |||| || Sbjct 2153247 GTGATCCTTGTAGAGCATGAAGGGGTTCCCCGTCTCGGTCTGCGCCTCGAGGATGGCGTA 2153306 Query 294057 CCAGACATCGCGAGCCTTCACCACGCGCTTTGCCTTC----CCCTCAGACTCATACTTGG 294112 ||||| | ||||||| | | | |||| | ||||||| || ||||| Sbjct 2153307 CCAGAGCTTCTGAGCCTTGA----GTGTCTTGCGACCGCGGCCCTCAGCTTCGTACTTCT 2153362 Query 294113 TGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGGCCAGGGCACTCGTGAGGGT 294172 ||| || |||| | || | |||||| || | ||||| || ||||||| ||| Sbjct 2153363 CGTACAGGGCTTCAAACTCATCGCCATAGCAGTCGGCAAGGCCGGGACACTCGTTGGGGC 2153422 Query 294173 CAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATGAATAGATCATTGACCCACA 294232 | |||| ||| | | ||| ||||||| ||||||||||| ||||| || ||| | Sbjct 2153423 ACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATGAAGAGATCGGGGATCCAGA 2153482 Query 294233 TTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCTTGATTACGACGGAGGAGCA 294292 ||| || | | |||||| || | ||||| || ||||| |||||| || Sbjct 2153483 GGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCGTGATTCTTGCGGAGGTCCA 2153542 Query 294293 GGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACAGCAAAGGACCC---CTTCC 294349 |||| || | || || | ||| || |||||||| | ||||||| || | Sbjct 2153543 GGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATGGCAAAGGCGCCAGGGCGCT 2153602 Query 294350 TGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAACACCTTCAGCATAGGCACGA 294409 || || ||||| | | | || | ||| ||| || || ||||| || | || Sbjct 2153603 TGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAGACGCGGAGCATGGGGATGA 2153662 Query 294410 TGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCGCGCCCGCGAATGTCGCTCA 294469 | || | || ||| ||||||||| || | || ||| |||||||| | | Sbjct 2153663 TACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCGGTGGCGCGAATGCGGTGGA 2153722 Query 294470 TGTGGAGACCAATGCCACC-GCCATACTTGGA 294500 || ||| ||||||||||| ||||| |||||| Sbjct 2153723 CGTTGAGGCCAATGCCACCTGCCAT-CTTGGA 2153753 >seq1 Length=7551078 Score = 111 bits (122), Expect = 3e-19 Identities = 439/687 (64%), Gaps = 13/687 (2%) Strand=Plus/Plus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || || || ||||| || |||||||||||||| |||||| | | || || || | | Sbjct 148529 GTGGGGTCGCTCTCGGGCGGCTGGAAGATGAAGCTCGCCCTCGCCAGGGCGATGCTGCAG 148588 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 || || || || ||||| || ||||| ||||||||| ||||| | ||||| | || Sbjct 148589 AAGGCGGACGTGCTCCTGCTCGACGAGCCGACCAACCACCTGGACGTCGCCAACATCGCG 148648 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875 ||||| | |||||| | | | | | | || | ||| || || || |||||| Sbjct 148649 TGGCTGCAGAACTACCTCAAGACCCACACGGAGATTACCAGCCTGATCGTGTCCCACGAC 148708 Query 279876 TCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTC 279935 || |||||||| || | || | | | |||| ||||| ||| || ||||||| Sbjct 148709 TCGGGCTTCCTCGACGAGGTCACCACGGACATCTACCACTACGAGGCCAACAAGAAGCTC 148768 Query 279936 TCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAA--AGCGCCCTGAGGCGGCCGCCT 279993 | | ||| ||||||||| | |||||||| ||| |||| || ||||| || Sbjct 148769 GCGCACTACACGGGCAACCTGGCGGCTTTCGT--CAAGCAGCGGCCCGAGGCCAAGAGCT 148826 Query 279994 ACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGAGG 280053 |||| || | | ||| || ||| | ||||| ||| || | ||| || Sbjct 148827 ACTACACGCTCTCCGCCTCCAACGTGCAGTTCAAGTTCCCCCCGCCCGGCATCCTGACGG 148886 Query 280054 GCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCCA 280113 || ||| || ||||| | | ||| | |||||||| | || || | Sbjct 148887 GCGTCAAGTCGCTCACGCGCGCCGTGCTCAAGATGACGCACGTCTCCTACACCTACCCGA 148946 Query 280114 ATGGCCCCAACATCTTCAGCAGTGTCAACTCG---CAGGTTTCTATGAACTCACGGATTG 280170 | | |||||| | | | | | |||| ||| | || || ||| || | | Sbjct 148947 AAGCCCCCAAGCCGTCCCTCGTCGACGCCTCGTGCCAGCTCTCCCTGTCCTCGCGCGTCG 149006 Query 280171 GTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGA-- 280228 |||| || ||||| || ||||| ||||| ||| | ||||| |||| || ||||| Sbjct 149007 CCATCATCGGCCCCAACGGCGCGGGCAAGTCCACCATGATCAAGCTCCTCACGGGCGAGC 149066 Query 280229 -GACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCG 280287 || || ||| | || || |||||| |||||| |||| || | ||| || Sbjct 149067 TGATCC---CCAGCGTCGGCAAGGTGGAGAAGCACCCCAACCTGCGCATCGGGTACATCA 149123 Query 280288 CTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTC 280347 |||||||| | | ||| | |||| ||||| || | ||| || ||||| ||| | | Sbjct 149124 AGCAGCACGCGCTGGAGCACGTGGAGATGCACCTCGAGAAGACGCCCAACCAGTACCTGC 149183 Query 280348 AGTGGCGCTATGCAAGTGGGCAGGATC 280374 ||||||| || || | ||| | |||| Sbjct 149184 AGTGGCGGTACGCCAACGGGGATGATC 149210 >seq3 Length=5489246 Score = 93.3 bits (102), Expect = 9e-14 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| |||||||| ||||| ||||| || ||||| ||||| ||||| ||||| Sbjct 303727 CTCCCGTATTGCCGTCATTGGCCCCAACGGTGCCGGCAAGTCCACCCTGATCAACGTCCT 303668 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 || || ||| | |||| ||||| | | |||| ||||| || || || Sbjct 303667 CACCGGTGAGCTCATCCCCACCGAGGGTGAGATCTACCAGCACGAGAACATCCGTATCGC 303608 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||| || || ||||| ||||||||||||| ||| || | Sbjct 303607 CTACATCAAGCAGCACGCCTTTGCTCATATCGACAACCACCTGGACAAGACCCCCTCGGA 303548 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCGC 280391 ||||| |||||||| | | || | || |||||| ||| | |||||||| Sbjct 303547 GTACATCCAGTGGCG-TTTCCAGACCGGCGAGGATCGCGAGACCATGGATCGC 303496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836576124297