Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq5 84.2 2e-11
>seq5
Length=3107351
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || || |||||||| || |||||||||||||||||| || | || ||
Sbjct 1010546 AGGCGGAGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGA 1010605
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
|||| || | ||||||||||| || |||||||||||||| || ||| | || |||
Sbjct 1010606 CCGTCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCC 1010665
Query 34030 TTGTCCATAATTTT 34043
|||||| ||| ||
Sbjct 1010666 TTGTCCTGAATCTT 1010679
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
||||| || || ||||| ||||| ||||||||| ||||||||||| | | |||
Sbjct 1009781 AGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGC 1009840
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
|||| || | ||||| ||||| || || || |||||||||||| || | | |||
Sbjct 1009841 CCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATACCCTCC 1009900
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089
|||||| |||||| ||| | | | | |||| | ||||| || | |||
Sbjct 1009901 TTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCACCTCCAGCGTG 1009960
Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || || || || | || ||||| ||||| |||||
Sbjct 1009961 ATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062317733634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |