Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2 107 4e-18 seq1 96.9 8e-15 >seq2 Length=6127077 Score = 107 bits (118), Expect = 4e-18 Identities = 257/386 (67%), Gaps = 2/386 (1%) Strand=Plus/Minus Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412 ||||||| ||||| ||| || | ||||| ||||| | || |||||| ||| Sbjct 687552 CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCA 687493 Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGA 243472 || |||||||||||||| ||| | |||| || | || || | ||| || Sbjct 687492 TCTCGCGCGACGAGGGCCTCCACACCGACTTCGCCTGCCTCCTCTACTCCCACCTCAAGC 687433 Query 243473 ACAAGCT-ACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAG 243531 ||| || | || | || ||| || |||||||| || || || | ||| || Sbjct 687432 ACAGGCCCAGCAAGCAGCTCGTTCAG-CAGATCATCACCGACGCCGTCGCGCTCGAGCAG 687374 Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591 || ||| | ||| ||| | || ||| | | ||||||||| | |||||| Sbjct 687373 GAGTTCCTCACCGAGGCTCTCCCCTGCGCCATGCTCGGCATGAACGCCACCCTCATGAAG 687314 Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 ||||||||||| ||||| |||||| | | || |||| || || | || || || ||| Sbjct 687313 CAGTACATCGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGCAACGACAAGGTCTAC 687254 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 || |||| |||||||| | |||||||||| ||| || || || || || |||||| Sbjct 687253 AAGTCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTC 687194 Query 243712 TTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||| ||||| ||| | || || || Sbjct 687193 TTCGAGAAGCGCGTCGGCGACTACCA 687168 >seq1 Length=7551078 Score = 96.9 bits (106), Expect = 8e-15 Identities = 230/345 (67%), Gaps = 2/345 (1%) Strand=Plus/Minus Query 333648 AGGAACCCGGGCTCGGGGAACTTCCACGTGGTC-TTCGTCTCGGTAAGGGCGTAGTAACT 333706 |||| |||||| ||||||||| || || | || | ||| || | |||||| || Sbjct 148881 AGGATGCCGGGCGGGGGGAACTTGAAC-TGCACGTTGGAGGCGGAGAGCGTGTAGTAGCT 148823 Query 333707 CGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTT 333766 | | ||||| |||| ||| ||||| | | ||| || ||| |||| | | ||||| Sbjct 148822 CTTGGCCTCGGGCCGCTGCTTGACGAAAGCCGCCAGGTTGCCCGTGTAGTGCGCGAGCTT 148763 Query 333767 TAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTG 333826 ||| | ||||| ||| || ||| || |||||||||| || |||||||| Sbjct 148762 CTTGTTGGCCTCGTAGTGGTAGATGTCCGTGGTGACCTCGTCGAGGAAGCCCGAGTCGTG 148703 Query 333827 TGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCAC 333886 ||||| |||| || | || ||| | || | | ||||| | ||||||| | Sbjct 148702 GGACACGATCAGGCTGGTAATCTCCGTGTGGGTCTTGAGGTAGTTCTGCAGCCACGCGAT 148643 Query 333887 GTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAG 333946 ||| | || || ||||||||||||||||| || || || | | || ||| | || Sbjct 148642 GTTGGCGACGTCCAGGTGGTTGGTCGGCTCGTCGAGCAGGAGCACGTCCGCCTTCTGCAG 148583 Query 333947 CATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991 ||| || | || || ||||| ||||| ||||| || || || || Sbjct 148582 CATCGCCCTGGCGAGGGCGAGCTTCATCTTCCAGCCGCCCGAGAG 148538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879759778950