Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 4e-18
seq1 96.9 8e-15
>seq2
Length=6127077
Score = 107 bits (118), Expect = 4e-18
Identities = 257/386 (67%), Gaps = 2/386 (1%)
Strand=Plus/Minus
Query 243353 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 243412
||||||| ||||| ||| || | ||||| ||||| | || |||||| |||
Sbjct 687552 CCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCA 687493
Query 243413 TCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGA 243472
|| |||||||||||||| ||| | |||| || | || || | ||| ||
Sbjct 687492 TCTCGCGCGACGAGGGCCTCCACACCGACTTCGCCTGCCTCCTCTACTCCCACCTCAAGC 687433
Query 243473 ACAAGCT-ACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACGAAAAG 243531
||| || | || | || ||| || |||||||| || || || | ||| ||
Sbjct 687432 ACAGGCCCAGCAAGCAGCTCGTTCAG-CAGATCATCACCGACGCCGTCGCGCTCGAGCAG 687374
Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591
|| ||| | ||| ||| | || ||| | | ||||||||| | ||||||
Sbjct 687373 GAGTTCCTCACCGAGGCTCTCCCCTGCGCCATGCTCGGCATGAACGCCACCCTCATGAAG 687314
Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651
||||||||||| ||||| |||||| | | || |||| || || | || || || |||
Sbjct 687313 CAGTACATCGAGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGCAACGACAAGGTCTAC 687254
Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711
|| |||| |||||||| | |||||||||| ||| || || || || || ||||||
Sbjct 687253 AAGTCCACCAACCCCTTCGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTC 687194
Query 243712 TTCGAAAAGCGTGTCAGTGATTATCA 243737
||||| ||||| ||| | || || ||
Sbjct 687193 TTCGAGAAGCGCGTCGGCGACTACCA 687168
>seq1
Length=7551078
Score = 96.9 bits (106), Expect = 8e-15
Identities = 230/345 (67%), Gaps = 2/345 (1%)
Strand=Plus/Minus
Query 333648 AGGAACCCGGGCTCGGGGAACTTCCACGTGGTC-TTCGTCTCGGTAAGGGCGTAGTAACT 333706
|||| |||||| ||||||||| || || | || | ||| || | |||||| ||
Sbjct 148881 AGGATGCCGGGCGGGGGGAACTTGAAC-TGCACGTTGGAGGCGGAGAGCGTGTAGTAGCT 148823
Query 333707 CGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTT 333766
| | ||||| |||| ||| ||||| | | ||| || ||| |||| | | |||||
Sbjct 148822 CTTGGCCTCGGGCCGCTGCTTGACGAAAGCCGCCAGGTTGCCCGTGTAGTGCGCGAGCTT 148763
Query 333767 TAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTG 333826
||| | ||||| ||| || ||| || |||||||||| || ||||||||
Sbjct 148762 CTTGTTGGCCTCGTAGTGGTAGATGTCCGTGGTGACCTCGTCGAGGAAGCCCGAGTCGTG 148703
Query 333827 TGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCAC 333886
||||| |||| || | || ||| | || | | ||||| | ||||||| |
Sbjct 148702 GGACACGATCAGGCTGGTAATCTCCGTGTGGGTCTTGAGGTAGTTCTGCAGCCACGCGAT 148643
Query 333887 GTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAG 333946
||| | || || ||||||||||||||||| || || || | | || ||| | ||
Sbjct 148642 GTTGGCGACGTCCAGGTGGTTGGTCGGCTCGTCGAGCAGGAGCACGTCCGCCTTCTGCAG 148583
Query 333947 CATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991
||| || | || || ||||| ||||| ||||| || || || ||
Sbjct 148582 CATCGCCCTGGCGAGGGCGAGCTTCATCTTCCAGCCGCCCGAGAG 148538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879759778950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |