Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq5 136 4e-27
seq1 105 7e-18
>seq5
Length=3107351
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||||||||| | | ||| || ||||| | |||||| || || || ||||||||||| |
Sbjct 1009771 ACCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGA 1009830
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||||||| |||| ||||||||||| ||||| | ||||| |||||||| || || ||
Sbjct 1009831 GAGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 1009890
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| || || || || || ||||| ||| || || | ||||| || |||||
Sbjct 1009891 AATACCCTCCTTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCAC 1009950
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||| || ||||| || || ||||| || |||||
Sbjct 1009951 CTCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|||||||| | | ||| || || || | || || || || ||||||||||| | |
Sbjct 1010000 CCGCCGCGGAGACGAAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 1010059
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| |||| || |||||||| ||||| | ||||| |||||||| || || |||
Sbjct 1010060 AGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1010119
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| || || || ||||| || || ||| || || | || || || || |||
Sbjct 1010120 ATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCGATGGTGTCCGAGGATTCGACT 1010179
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || | |||||||||||| | ||| || ||||| ||||||||
Sbjct 1010180 TCTAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATTTGCAT 1010226
Score = 113 bits (124), Expect = 5e-20
Identities = 140/190 (74%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||||| ||||| || || ||||||||||| || | | ||| || ||||
Sbjct 1010552 AGAACAAGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCC 1010611
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||||||||| |||| || |||||||||||||| || || || || || ||
Sbjct 1010612 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 1010671
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409
|| || || ||| ||| || | |||| ||| || ||||| || | || | ||
Sbjct 1010672 TGAATCTTCGACTTGACATTGTCGATGGTAT--CCGACGACTCCACCTCGAGGGTGATGG 1010729
Query 64410 TCTTGCCGGT 64419
||||||||||
Sbjct 1010730 TCTTGCCGGT 1010739
Score = 89.7 bits (98), Expect = 5e-13
Identities = 141/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || || |||||||| || | | ||| || |||||
Sbjct 1010243 AGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCT 1010302
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| |||||||| ||| | || || ||||||||||| |||||||| || || || ||
Sbjct 1010303 TCAAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 1010362
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || || || || || | || | ||||
Sbjct 1010363 TGGATCTTCGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTC 1010422
Query 64412 TTGCCGGTCAAAGTTTTTACGA 64433
|||||||| | || || ||||
Sbjct 1010423 TTGCCGGTAAGGGTCTTGACGA 1010444
>seq1
Length=7551078
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||||| | ||||| || || | ||||| || || || |||||||| || |
Sbjct 7246776 ACCACCGCGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGA 7246717
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| |||||| |||| || |||||||||||||| | || || |||||||| ||||| ||
Sbjct 7246716 GAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGG 7246657
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | || || || || ||
Sbjct 7246656 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGAC 7246597
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||||||| || | || || ||||| || |||||
Sbjct 7246596 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644693825480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |