Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq2 147 2e-30
seq1 125 7e-24
seq5 113 4e-20
>seq2
Length=6127077
Score = 147 bits (162), Expect = 2e-30
Identities = 295/433 (68%), Gaps = 7/433 (2%)
Strand=Plus/Minus
Query 47148 GCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATG 47207
|| |||||| |||||||||| |||||||| || ||| ||| | || || | |
Sbjct 687598 GCCTTCGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCGTCCATCTTCTGGCTC 687539
Query 47208 AAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAA 47267
|| | || | ||||||||||| || || ||||||||| |||||| | |||||
Sbjct 687538 AAGAAGCGCGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGCGACGAG 687479
Query 47268 GGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGTTGGA 47326
||||| |||||| |||| ||||| ||| |||| | || || | || | |
Sbjct 687478 GGCCTCCACACCGACTTCGCCTGCCTCCTCTACTCCCACC----TCAAGCACAGGCCCAG 687423
Query 47327 CGTGCCCACCGT-CAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCG 47385
| || ||| |||| | || | |||| |||||||| | ||| |||||| ||
Sbjct 687422 CAAGCAGCTCGTTCAGC-AGATCATCACCGACGCCGTCGCGCTCGAGCAGGAGTTCCTCA 687364
Query 47386 CCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCG 47445
|||||||||| ||| | | | || |||||||| | |||| |||||||||
Sbjct 687363 CCGAGGCTCTCCCCTGCGCCATGCTCGGCATGAACGCCACCCTCATGAAGCAGTACATCG 687304
Query 47446 AATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGA 47505
| || ||||||||| | |||||||| || | |||| | ||| | || |
Sbjct 687303 AGTTCGTCGCCGACAGGCTGCTCGTCGCCCTCGGCAACGACAAGGTCTACAAGTCCACCA 687244
Query 47506 ATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGC 47565
| || ||||| |||||| | ||||| || || | |||||||||||||| ||||||||||
Sbjct 687243 ACCCCTTCGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGC 687184
Query 47566 GCGTCGGCGAATA 47578
|||||||||| ||
Sbjct 687183 GCGTCGGCGACTA 687171
>seq1
Length=7551078
Score = 125 bits (138), Expect = 7e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| |||||||| | |||| ||| | || | || ||||| || || || ||||| |||
Sbjct 7246778 GCACCACCGCGCAGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 7246719
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| ||||| || || ||||| || || ||| |||||| ||||||||||||||
Sbjct 7246718 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGG 7246659
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| ||||||||||||||| ||| || ||||| | |||| ||||||| ||||
Sbjct 7246658 GGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCG 7246599
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115
|| |||| ||| | || ||||| || || || || || || ||||||||||
Sbjct 7246598 ACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGG 7246547
>seq5
Length=3107351
Score = 113 bits (124), Expect = 4e-20
Identities = 143/194 (74%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981
||| || || || |||||||| | |||||| || || ||||| ||||| ||| |
Sbjct 1010035 CTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCGGCGAA 1010094
Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040
||| | ||||||||||| || || |||||||||||||| ||| || ||||| |||
Sbjct 1010095 GATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTT 1010154
Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100
| |||| |||||||| |||||||| | ||| | || |||||||| ||||| || |
Sbjct 1010155 G-TCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGGTGAGAGTCTTGA 1010213
Query 127101 CAAAAATCTGCATG 127114
| || || ||||||
Sbjct 1010214 CGAAGATTTGCATG 1010227
Score = 96.9 bits (106), Expect = 3e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || ||||| ||||| ||| || || ||| || || ||||| || ||
Sbjct 1010567 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCG 1010626
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | |||| |||||||| ||||| || ||||||||||||||| || ||| ||||
Sbjct 1010627 GCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTG 1010686
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGT 127089
| | |||| ||| |||| ||| || |||| ||| | || ||||||||
Sbjct 1010687 ACATTGTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 1010739
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| || || || || || || || || |||
Sbjct 1010258 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCTTCAAGTTGCTTGCCA 1010317
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| |||||||| || ||||| ||||||||||| ||| ||| ||| ||||
Sbjct 1010318 GCAAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTG 1010377
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| ||||| | |||||| |||| ||| | || |||||||| || ||
Sbjct 1010378 ACGTTG-TCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGT 1010436
Query 127096 TTTTAC 127101
|| ||
Sbjct 1010437 CTTGAC 1010442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500698956080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |