Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
seq5 123 3e-23
seq2 114 1e-20
>seq1
Length=7551078
Score = 147 bits (162), Expect = 2e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||| || || | || |||||| ||||| ||||||||||| || ||||| |
Sbjct 7246764 ACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 7246705
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| |||||||||||||||||||| |||| ||||||||| |||| || | || ||||||
Sbjct 7246704 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCCTT 7246645
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | ||||| || || || || | |||||
Sbjct 7246644 GTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGAT 7246585
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| |||||||| || || || || ||||| |||||
Sbjct 7246584 GGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549
>seq5
Length=3107351
Score = 123 bits (136), Expect = 3e-23
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||||||||| || || || |||| || |||||||||||||||||
Sbjct 1010572 CTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCGAA 1010631
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||||| ||| | || |||||||||| |||||| ||||| |
Sbjct 1010632 AATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 1010691
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | || || ||| ||||| || | |||||||| ||||| ||
Sbjct 1010692 GTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 1010739
Score = 120 bits (132), Expect = 3e-22
Identities = 147/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| ||||| ||||| || || || ||||| |||| || |||||||| |||
Sbjct 1010030 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCG 1010089
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516
||||| || | |||||||| || | || | || ||||||||| |||||| ||||
Sbjct 1010090 GCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTG 1010149
Query 46517 AGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575
| ||| | | | ||||| ||||| || || | |||||||| ||||| || || ||
Sbjct 1010150 A-CGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGGTGAGAGT 1010208
Query 46576 TTTAACAAAGATTTGCAT 46593
|| || |||||||||||
Sbjct 1010209 CTTGACGAAGATTTGCAT 1010226
Score = 116 bits (128), Expect = 4e-21
Identities = 136/181 (75%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || || || |||| || || |||||||| || ||
Sbjct 1010263 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAA 1010322
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | || |||||| ||| ||||||| ||||| |||
Sbjct 1010323 GATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTGA-CGT 1010381
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||||| || || || || | |||||||| ||||| || || || || |
Sbjct 1010382 TGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGA 1010441
Query 46581 C 46581
|
Sbjct 1010442 C 1010442
>seq2
Length=6127077
Score = 114 bits (126), Expect = 1e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 46398 TACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGG 46457
||| | |||| || || |||||||| || || || || |||| |||||||||||||| |
Sbjct 5085448 TACACACCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAG 5085507
Query 46458 CGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517
|||| || | |||||| || |||| || | || |||||||||| |||||| ||| |
Sbjct 5085508 CGAAGATGAGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCA 5085567
Query 46518 GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577
| | | ||||||| || || || || | |||||||| ||||||||||| || |
Sbjct 5085568 CATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCT 5085627
Query 46578 TAACAAAG 46585
| || |||
Sbjct 5085628 TCACGAAG 5085635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238279886840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |