Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1 147 2e-30 seq5 123 3e-23 seq2 114 1e-20 >seq1 Length=7551078 Score = 147 bits (162), Expect = 2e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | || |||||| ||||| ||||||||||| || ||||| | Sbjct 7246764 ACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 7246705 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| |||||||||||||||||||| |||| ||||||||| |||| || | || |||||| Sbjct 7246704 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCCTT 7246645 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | ||||| || || || || | ||||| Sbjct 7246644 GTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTGAT 7246585 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||| || || || || ||||| ||||| Sbjct 7246584 GGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 7246549 >seq5 Length=3107351 Score = 123 bits (136), Expect = 3e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| || || || |||| || ||||||||||||||||| Sbjct 1010572 CTCCTTCTGAATGTTGTAGTCGGACAGGGTCCGACCGTCCTCAAGCTGCTTGCCGGCGAA 1010631 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||||| ||| | || |||||||||| |||||| ||||| | Sbjct 1010632 AATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 1010691 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | || || ||| ||||| || | |||||||| ||||| || Sbjct 1010692 GTCGATGGTATCCGACGACTCCACCTCGAGGGTGATGGTCTTGCCGGT 1010739 Score = 120 bits (132), Expect = 3e-22 Identities = 147/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || |||||||| ||||| ||||| || || || ||||| |||| || |||||||| ||| Sbjct 1010030 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGCTTTCCG 1010089 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 ||||| || | |||||||| || | || | || ||||||||| |||||| |||| Sbjct 1010090 GCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTG 1010149 Query 46517 AGCGTCGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575 | ||| | | | ||||| ||||| || || | |||||||| ||||| || || || Sbjct 1010150 A-CGTTGTCGATGGTGTCCGAGGATTCGACTTCTAGGGTGATGGTCTTGCCGGTGAGAGT 1010208 Query 46576 TTTAACAAAGATTTGCAT 46593 || || ||||||||||| Sbjct 1010209 CTTGACGAAGATTTGCAT 1010226 Score = 116 bits (128), Expect = 4e-21 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || || || |||| || || |||||||| || || Sbjct 1010263 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCGGCCGTCTTCAAGTTGCTTGCCAGCAAA 1010322 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||||||| | || | || |||||| ||| ||||||| ||||| ||| Sbjct 1010323 GATCAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTCGACTTGA-CGT 1010381 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| || || || || | |||||||| ||||| || || || || | Sbjct 1010382 TGTCGATCGTGTCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGA 1010441 Query 46581 C 46581 | Sbjct 1010442 C 1010442 >seq2 Length=6127077 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 46398 TACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGG 46457 ||| | |||| || || |||||||| || || || || |||| |||||||||||||| | Sbjct 5085448 TACACACCTTCTGAATGTTGTAGTCAGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCAG 5085507 Query 46458 CGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA 46517 |||| || | |||||| || |||| || | || |||||||||| |||||| ||| | Sbjct 5085508 CGAAGATGAGGCGCTGTTGATCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCA 5085567 Query 46518 GCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||||| || || || || | |||||||| ||||||||||| || | Sbjct 5085568 CATTGTCGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCT 5085627 Query 46578 TAACAAAG 46585 | || ||| Sbjct 5085628 TCACGAAG 5085635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238279886840