Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 253 2e-62
seq1 149 6e-31
seq5 125 7e-24
>seq2
Length=6127077
Score = 253 bits (280), Expect = 2e-62
Identities = 369/515 (72%), Gaps = 10/515 (2%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| ||||| || || || ||||| || ||||| || || || || || || |
Sbjct 687152 CATGACGCCGGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCC 687211
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707
|| ||| ||| | |||||| || |||||||||| | |||||| |||| ||||
Sbjct 687212 CAGGGAGATGTTCTCCATAAAGTCGAAGGGGTTGGTGGACTTGTAGACCTTGTCGTTGCC 687271
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766
|| || ||||||||||||||||||| |||||||||||||| ||| |||| | | ||
Sbjct 687272 GA---GGGCGACGAGCAGCCTGTCGGCGACGAACTCGATGTACTGCTTCATGAGGGTGGC 687328
Query 132767 AATTAAGTCCCAGCA-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825
| | | || |||| | |||| || || || |||||||| || ||||||| |||
Sbjct 687329 GTTCATG-CCGAGCATGGCGCAGGGG-AGAGCCTCGGTGAGGAACTCCTGCTCGAGCGCG 687386
Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTG 132885
|| |||||||||| ||| | | |||| || | ||| |||| ||| | || |
Sbjct 687387 ACGGCGTCGGTGATGATCTGCTGAACGAGCTGCTTGCTGGGCCTGTGCTTGAGGTGGGAG 687446
Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945
| | | ||| || |||||| || | ||||||||| | || ||||| |||||| |
Sbjct 687447 TAGAGGAGGCAGGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAG 687506
Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005
|| |||| |||||||||||||||||| || |||||||| || |||| ||||| ||
Sbjct 687507 AAGGTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGCACCG 687566
Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065
||||||| |||||||||||| ||||| ||||||||||||| | |||| ||||| ||
Sbjct 687567 CTGAAGAAGATGCCCTCGACGGCGGCGAAGGCCACCAGGCGCTGGGCGAAGGTGGCATCG 687626
Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
| | |||||| || || ||||| ||||||||
Sbjct 687627 CGGTCGCTGATCCATCGGAGAGCCCAGTCGGCCTT 687661
Score = 152 bits (168), Expect = 5e-32
Identities = 202/277 (73%), Gaps = 5/277 (2%)
Strand=Plus/Plus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| |||||||||||| || ||| | || ||||| | |||||| || ||| || ||
Sbjct 687806 GTATGTGTCGATGAGGAGAGAGTACGTCTCGGAGTGGATGTTCTCAATCATGATCTGGAA 687865
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285
|||||| ||||| || |||||| | ||| || || | || ||| | ||||| || |
Sbjct 687866 GCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTC-GGCGCTGAACCTCTCGATGAGGT 687924
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| ||||||||||||||||| ||||||||| ||||| || | ||| |||||| |
Sbjct 687925 TCTCGTTGACGATGCCGTCTGAGGCGGCGAAGAAGGCGAGGATGTGGGAGATGAAGAACC 687984
Query 133346 GCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402
|||||| |||| | | | | ||||||| | ||||||||| ||||| | |||||
Sbjct 687985 GCTCGTCGTCGGTGAGCTTGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCT 688044
Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| ||||||| || || |||||| || ||||||||
Sbjct 688045 CGGCGGTCCAGAAGGAAGCCTCGTGCTTCTTGTACAT 688081
Score = 111 bits (122), Expect = 2e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| | || |||||| || |||||| |
Sbjct 5085634 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATC 5085575
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| || ||| |||| |||||||| |||
Sbjct 5085574 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAACAGCGCCTC 5085515
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| ||||| ||||| || |||| || ||||| ||||||||||| || |||
Sbjct 5085514 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCTGACTACAACATTCAGAAG 5085455
Query 38433 G 38433
|
Sbjct 5085454 G 5085454
>seq1
Length=7551078
Score = 149 bits (164), Expect = 6e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| ||||||||| |||| |||||| || |
Sbjct 7246549 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 7246608
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||| ||||| || ||| |||| ||
Sbjct 7246609 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 7246668
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || |||| ||||||||| ||||||||||
Sbjct 7246669 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 7246728
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| |||| || || | ||||||||| || | || ||
Sbjct 7246729 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCGTCTGCGCGGTGG 7246775
>seq5
Length=3107351
Score = 125 bits (138), Expect = 7e-24
Identities = 169/230 (73%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| ||||| ||||||||| | || ||||| || |
Sbjct 1010226 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCG 1010167
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || |||| ||||| ||||| |||||| | || ||
Sbjct 1010166 GACACCATCGACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCA 1010108
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || |||||||| |||| ||||| ||| || |||||
Sbjct 1010107 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAA 1010048
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| ||| || || || | || || ||| | | ||||||
Sbjct 1010047 CATCCAGAAGGAGAGC-ACTCTCCACCTCGTCCTTCGTCTCCGCGGCGGC 1009999
Score = 116 bits (128), Expect = 4e-21
Identities = 158/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||| | || || || || ||||| | || || || || |
Sbjct 1009998 ATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCA 1009939
Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|| | | | | |||| | |||| ||||| | ||||| ||||| |||||| | || |
Sbjct 1009938 GATACCATCGATAACG--TGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATC 1009881
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| || || ||||| || |||| |||||||||| || ||||
Sbjct 1009880 AGCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACA 1009821
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||| ||||| ||||||||||| | || || ||
Sbjct 1009820 ACATCCAGAAGGAGTCGACGCTGCATCTCGTCCTTCG 1009784
Score = 107 bits (118), Expect = 2e-18
Identities = 159/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309
||| |||| || || || || ||||| ||||||||| |||| |||||| || ||||||
Sbjct 1010448 ATAGTCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACG 1010389
Query 38310 GTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368
| | |||| | || || |||| || || ||||| ||||| | ||||| |||||
Sbjct 1010388 ATCGACAACG-TCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCG 1010330
Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428
|| || | || ||||| || || || |||| || ||||| |||||||||||||||
Sbjct 1010329 CCTGATCTTTGCTGGCAAGCAACTTGAAGACGGCCGGACCCTGTCCGACTACAACATCCA 1010270
Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||| | || || || | || || ||| | | ||||||
Sbjct 1010269 GAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTCCGTGGCGGC 1010227
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||| ||||| ||||||||| |||| || ||| | | || | | | | | | ||
Sbjct 1010741 TCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGT 1010682
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| || | ||||| ||||| || || ||||||| ||||| || |||| ||| ||||
Sbjct 1010681 CGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 1010622
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| ||||| || |||| || ||||| |||||||||||| || ||||| |||| || |
Sbjct 1010621 AGCAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTC 1010562
Query 38446 ATTTGGTGCTGCG 38458
|| | || || ||
Sbjct 1010561 ATCTTGTTCTCCG 1010549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172693713280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |