Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 253 2e-62 seq1 149 6e-31 seq5 125 7e-24 >seq2 Length=6127077 Score = 253 bits (280), Expect = 2e-62 Identities = 369/515 (72%), Gaps = 10/515 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| ||||| || || || ||||| || ||||| || || || || || || | Sbjct 687152 CATGACGCCGGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCC 687211 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGG---TGCC 132707 || ||| ||| | |||||| || |||||||||| | |||||| |||| |||| Sbjct 687212 CAGGGAGATGTTCTCCATAAAGTCGAAGGGGTTGGTGGACTTGTAGACCTTGTCGTTGCC 687271 Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGC 132766 || || ||||||||||||||||||| |||||||||||||| ||| |||| | | || Sbjct 687272 GA---GGGCGACGAGCAGCCTGTCGGCGACGAACTCGATGTACTGCTTCATGAGGGTGGC 687328 Query 132767 AATTAAGTCCCAGCA-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCG 132825 | | | || |||| | |||| || || || |||||||| || ||||||| ||| Sbjct 687329 GTTCATG-CCGAGCATGGCGCAGGGG-AGAGCCTCGGTGAGGAACTCCTGCTCGAGCGCG 687386 Query 132826 ACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTG 132885 || |||||||||| ||| | | |||| || | ||| |||| ||| | || | Sbjct 687387 ACGGCGTCGGTGATGATCTGCTGAACGAGCTGCTTGCTGGGCCTGTGCTTGAGGTGGGAG 687446 Query 132886 AACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTG 132945 | | | ||| || |||||| || | ||||||||| | || ||||| |||||| | Sbjct 687447 TAGAGGAGGCAGGCGAAGTCGGTGTGGAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAG 687506 Query 132946 AAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCC 133005 || |||| |||||||||||||||||| || |||||||| || |||| ||||| || Sbjct 687507 AAGGTCAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGACGCGAAGGCACCG 687566 Query 133006 GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCT 133065 ||||||| |||||||||||| ||||| ||||||||||||| | |||| ||||| || Sbjct 687567 CTGAAGAAGATGCCCTCGACGGCGGCGAAGGCCACCAGGCGCTGGGCGAAGGTGGCATCG 687626 Query 133066 TTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | | |||||| || || ||||| |||||||| Sbjct 687627 CGGTCGCTGATCCATCGGAGAGCCCAGTCGGCCTT 687661 Score = 152 bits (168), Expect = 5e-32 Identities = 202/277 (73%), Gaps = 5/277 (2%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||||||| || ||| | || ||||| | |||||| || ||| || || Sbjct 687806 GTATGTGTCGATGAGGAGAGAGTACGTCTCGGAGTGGATGTTCTCAATCATGATCTGGAA 687865 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 |||||| ||||| || |||||| | ||| || || | || ||| | ||||| || | Sbjct 687866 GCCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTC-GGCGCTGAACCTCTCGATGAGGT 687924 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | ||||||||||||||||| ||||||||| ||||| || | ||| |||||| | Sbjct 687925 TCTCGTTGACGATGCCGTCTGAGGCGGCGAAGAAGGCGAGGATGTGGGAGATGAAGAACC 687984 Query 133346 GCTCGTTGTCGTT---CAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 |||||| |||| | | | | ||||||| | ||||||||| ||||| | ||||| Sbjct 687985 GCTCGTCGTCGGTGAGCTTGTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCAATCTCCT 688044 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || ||||||| || || |||||| || |||||||| Sbjct 688045 CGGCGGTCCAGAAGGAAGCCTCGTGCTTCTTGTACAT 688081 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| || |||||| | Sbjct 5085634 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATC 5085575 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| |||| |||||||| ||| Sbjct 5085574 GACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAACAGCGCCTC 5085515 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || |||| || ||||| ||||||||||| || ||| Sbjct 5085514 ATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCTGACTACAACATTCAGAAG 5085455 Query 38433 G 38433 | Sbjct 5085454 G 5085454 >seq1 Length=7551078 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| ||||||||| |||| |||||| || | Sbjct 7246549 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 7246608 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| ||||| ||||| || ||| |||| || Sbjct 7246609 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGATCAG 7246668 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || |||| ||||||||| |||||||||| Sbjct 7246669 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAAC 7246728 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| |||| || || | ||||||||| || | || || Sbjct 7246729 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTGCGTCTGCGCGGTGG 7246775 >seq5 Length=3107351 Score = 125 bits (138), Expect = 7e-24 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||||||| | || ||||| || | Sbjct 1010226 ATGCAAATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTAGAAGTCGAATCCTCG 1010167 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || |||| ||||| ||||| |||||| | || || Sbjct 1010166 GACACCATCGACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGATCA 1010108 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || |||||||| |||| ||||| ||| || ||||| Sbjct 1010107 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGCACGCTCTCTGATTACAA 1010048 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| ||| || || || | || || ||| | | |||||| Sbjct 1010047 CATCCAGAAGGAGAGC-ACTCTCCACCTCGTCCTTCGTCTCCGCGGCGGC 1009999 Score = 116 bits (128), Expect = 4e-21 Identities = 158/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || || || || ||||| | || || || || | Sbjct 1009998 ATGCAGATCTTCGTGAAGACGTTGACTGGGAAGACTATCACGCTGGAGGTGGAATCCTCA 1009939 Query 38304 GACAGCGTGCA-AACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | |||| ||||| | ||||| ||||| |||||| | || | Sbjct 1009938 GATACCATCGATAACG--TGAAGAGCAAAATTCAGGACAAGGAGGGTATTCCCCCGGATC 1009881 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || ||||| || |||| |||||||||| || |||| Sbjct 1009880 AGCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGACGGGCGCACCCTCTCGGATTACA 1009821 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| ||||||||||| | || || || Sbjct 1009820 ACATCCAGAAGGAGTCGACGCTGCATCTCGTCCTTCG 1009784 Score = 107 bits (118), Expect = 2e-18 Identities = 159/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 38250 ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGC 38309 ||| |||| || || || || ||||| ||||||||| |||| |||||| || |||||| Sbjct 1010448 ATAGTCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGACACG 1010389 Query 38310 GTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCG 38368 | | |||| | || || |||| || || ||||| ||||| | ||||| ||||| Sbjct 1010388 ATCGACAACG-TCAAGTCGAAGATCCAGGATAAGGAGGGCATTCCTCCTGACCAGCAGCG 1010330 Query 38369 GCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCA 38428 || || | || ||||| || || || |||| || ||||| ||||||||||||||| Sbjct 1010329 CCTGATCTTTGCTGGCAAGCAACTTGAAGACGGCCGGACCCTGTCCGACTACAACATCCA 1010270 Query 38429 AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| | || || || | || || ||| | | |||||| Sbjct 1010269 GAAGGAGTCCACCCTTCACCTCGTCCTCCGTCTCCGTGGCGGC 1010227 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||| ||||| ||||||||| |||| || ||| | | || | | | | | | || Sbjct 1010741 TCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCGGATACCATCGACAATGTCAAGT 1010682 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || || | ||||| ||||| || || ||||||| ||||| || |||| ||| |||| Sbjct 1010681 CGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 1010622 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || |||| || ||||| |||||||||||| || ||||| |||| || | Sbjct 1010621 AGCAGCTTGAGGACGGTCGGACCCTGTCCGACTACAACATTCAGAAGGAGTCGACCCTTC 1010562 Query 38446 ATTTGGTGCTGCG 38458 || | || || || Sbjct 1010561 ATCTTGTTCTCCG 1010549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172693713280