Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6 232 8e-56 seq7 165 1e-35 seq5 100 4e-16 seq2 82.4 1e-10 >seq6 Length=2704119 Score = 232 bits (256), Expect = 8e-56 Identities = 425/618 (69%), Gaps = 5/618 (1%) Strand=Plus/Minus Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 ||||| |||| ||| | ||| ||||| | ||||||| | | ||| | || | Sbjct 1892183 TCTTTTTTATTTTTTCTTTTGAACTCATTGATGAAGTGTTGGACGAGGCGGTTGTCCATG 1892124 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || |||||||| | ||| || || || ||||| || ||||| || ||||| || | || Sbjct 1892123 TCCTCACCACCAAGGTGAGTGTCGCCAGCGGTGGCCTTGACCTCGAAGATGCCCTCCTCG 1892064 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| | | | || ||||| || ||||||||||| || ||||| ||||| ||||| Sbjct 1892063 ATGGTCAGGAGGGAGACATCGAAGGTACCACCACCGAGATCAAAGATGAGAACGTTGCGC 1892004 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 ||| | || ||||| ||||||||||| || || || || || || || || || || Sbjct 1892003 TCGCCCTCAACCTTCTTGTCGAGACCGTAGGCAATGGCGGCGGCGGTGGGCTCGTTGATG 1891944 Query 7643 ATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCA-TCTTTCGTCGCTTGTCGTTGCGA 7701 || || || ||| || || ||||| | |||| | || || || || || || ||||| Sbjct 1891943 ATGCGGAGCACGTTGAGACCGGCAAT-GAGGCCGGAGTCCTTGGTGGCCTGGCGCTGCGA 1891885 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| |||||||| || || || ||||| |||| || || | | ||||| || Sbjct 1891884 GTCGTTGAAGTAGGCGGGCACGGTGACGACAGCGTTGGTCACGGTTTCGCCGAGGTAGCT 1891825 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || || | || ||| ||||| || ||||| | |||||||| || | | || || Sbjct 1891824 CTCAGCAGTCTCGCGCATCTTGGTGAGGACCATGGCGGAAATCTCCTCGGGGGTGAAGTG 1891765 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAAC 7881 || || || || || || || || || || | ||| ||| ||| || | ||| | Sbjct 1891764 CTTGGTCTCTCCCTTGAACTCGACCTCGATGACGGGCTTA-CCG--GCCTTGTCGATGAT 1891708 Query 7882 CTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGAT 7941 ||| | || | | ||||| ||| || |||| |||| || ||||| | ||||| Sbjct 1891707 CTTGAAAGAGAAGTGCTTCATGTCGGACTGAACCTCGGGGTCGGAGAACTTGCGGCCGAT 1891648 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001 |||||||| || || || || ||||| |||||||||||||| |||||||| || || Sbjct 1891647 GAGACGCTTGGCGTCGAAGACCGTGTTCTTGGGGTTCATGGCGACCTGGTTCTTGGCGGC 1891588 Query 8002 GTCCCCGATAAGACGTTC 8019 || ||||| ||||| || Sbjct 1891587 ATCTCCGATGAGACGCTC 1891570 >seq7 Length=2136105 Score = 165 bits (182), Expect = 1e-35 Identities = 369/547 (67%), Gaps = 19/547 (3%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAA--TGGATGTATAGAAATCAACGCCGTCGTATAACG 7301 || ||||| ||||| |||||||||| || ||| |||| || |||||||| | | | Sbjct 825606 AGGTCCTCGAAACGGGCACGGGTAATCTGCATG--GAGAAGTCCTCGCCGTCGAACAGAG 825663 Query 7302 AATCAATTTCAATGGTTGTTTGTG--CCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 | ||||| |||||||| | || | ||| | || | || | ||| || ||||| || Sbjct 825664 AGTCAATCTCAATGGTGGCCTGGGCACCGCTG--GACAGGGTCCTCTTGGCACGCTCGCA 825721 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 ||||| | | ||| || ||||||||||||| || | ||| ||||| || || Sbjct 825722 AGCCGTCCTAAGACGGCGGAGGGCACGCGGGTCGGCGCTGAGATCCTTCTTGGTCTTGCG 825781 Query 7420 TTTAAACTCTTCAGAGAAGT-GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | ||||| | | ||| |||| ||||| | | |||||| || | |||||| | | Sbjct 825782 AGTGAACTCCTTCTTGCAGTGGTCG-AGGAGGTTGGTATCGAAGTCCTGACCACCAAGAT 825840 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | || || || | ||| || ||||| |||| ||| || | ||||| | | |||| Sbjct 825841 GGGTGTCACCGGAGGTGGCCTTGACGGTGAAGACACCACCCTGGATGTTAAGAAGAGAAA 825900 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCT 7598 |||| || |||||||| || || || | ||||| ||||| || | | ||| ||| Sbjct 825901 CATCGAAAGTACCACCGCCAAGATCGTAGATGAGCACGTTGCGCTCCTTG---TTGGTCT 825957 Query 7599 T------ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGAC 7652 | |||||||||| ||||| || || || || || || || || ||||| || Sbjct 825958 TGCCAGAGCCGAGACCGTAGGCGATGGCAGCGGCAGTGGGCTCGTTGATGATACGGAGGA 826017 Query 7653 AGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 ||| || || ||||| | | ||||| || || || || || || ||||| |||| Sbjct 826018 CGTTGAGACCGGCAATGGCACCGGCATCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGT 826077 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATAT 7772 |||| ||||| || ||||| || | | ||| ||||| || | | | || ||||| | Sbjct 826078 AGGCGGGGACGGTGACGACGGCCTTCTCGACCTTCTTGCCAATCTTGGCCTCGGCGATCT 826137 Query 7773 CTTTCAT 7779 | ||||| Sbjct 826138 CCTTCAT 826144 >seq5 Length=3107351 Score = 100 bits (110), Expect = 4e-16 Identities = 184/265 (69%), Gaps = 10/265 (4%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAG---GTCAAAAATGA-GT-ACGTTCGTATCGTCGT 7589 |||||||| || ||||||||||| || || | ||||| || ||| || | | | | Sbjct 1111349 GAAACATCGAAAGTACCACCACCGAGATCGTACACAATGATGTGACGCTC--ACCAGCAT 1111292 Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 | | |||| || |||||||| || ||||| ||||| || || || || | ||||| | Sbjct 1111291 C---GGTCTTGTCAAGACCGTAGGCAATAGCGGCCGCAGTAGGCTCGTTGACGATACGGA 1111235 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 | ||| ||||| ||||| | || || || || || || || || ||||| | Sbjct 1111234 GGACGTTAAGGCCGGCAATCACACCGGCGTCCTTGGTAGCCTGGCGCTGGTTGTCGTTGA 1111175 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 ||||||| ||||| || ||||| |||| ||||| |||| || || || || |||| Sbjct 1111174 AGTAGGCGGGGACGGTAACGACGGCGTGGGTGACGGTCTTGCCAAGGTAGCCCTCAGCGA 1111115 Query 7770 TATCTTTCATTTTGGTAAGAACCAT 7794 || ||||| ||| ||||| ||| Sbjct 1111114 CCTCCTTCATCTTGCCAAGAATCAT 1111090 >seq2 Length=6127077 Score = 82.4 bits (90), Expect = 1e-10 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 104707 TAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGAT 104766 ||||| |||| ||| ||||| ||||| ||||||||||| || | |||||||| ||| | Sbjct 2152600 TAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGTTTCCGAGGATCTGGGACGTGCTT 2152659 Query 104767 GCGGTAGGCATAGGTGCAAGAAGAAGACTATTC 104799 || || |||||||| || || || ||||| ||| Sbjct 2152660 GCCGTGGGCATAGGAGCGAGCAGCAGACTGTTC 2152692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132665034280