Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2 206 3e-48
seq1 84.2 3e-11
>seq2
Length=6127077
Score = 206 bits (228), Expect = 3e-48
Identities = 699/1076 (65%), Gaps = 21/1076 (2%)
Strand=Plus/Minus
Query 111924 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGG 111983
||||| || || ||||| ||||| || ||| ||| || || ||||| | || | |||
Sbjct 2153666 GGTATCATCCCCATGCTCCGCGTCTTCAACAACACCGCCCGATATGTCGATCAGGGCGGG 2153607
Query 111984 CGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAG 112040
||| || | | || ||||||| ||||| ||||| || ||| || | ||
Sbjct 2153606 AACAAGCGCCCTGGCGCCTTTGCCATCTATCTGGAGCCGTGGCATGCTGATGTCTTTGAA 2153547
Query 112041 TTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCC 112100
||||| || | || || || || | |||||| || ||||||||||||| |
Sbjct 2153546 TTCCTGGACCTCCGCAAGAATCACGGCAAGGAGGAGATTCGTGCCCGCGATCTCTTCCTC 2153487
Query 112101 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 112160
|| |||||||| || ||||||||||||||| |||| ||| ||| |||| ||||| ||||
Sbjct 2153486 GCCCTCTGGATCCCCGATCTCTTCATGAAGCGAGTGGAGAAGAATGGCGATTGGACTCTG 2153427
Query 112161 TTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCT 112219
| || || || || ||||| || |||| ||| ||| || ||||||||||||||
Sbjct 2153426 ATGTGCCCCAACGAGTGTCCCGGCCTTGCCGACTGCTATGGC-GATGAGTTTGAAGCCCT 2153368
Query 112220 CTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTGCCAGCTGCCGATG-T 112276
||| |||||||| | || | | ||| || ||| | | || | || | |
Sbjct 2153367 GTACGAGAAGTACGAAGCTGAGGGCC--GCGGTCGCAAGACACT-CAAGGCTCAGAAGCT 2153311
Query 112277 GTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGA 112336
||| | || || ||| || | || |||||||| || | || | ||||| ||||| ||
Sbjct 2153310 CTGGTACGCCATCCTCGAGGCGCAGACCGAGACGGGGAACCCCTTCATGCTCTACAAGGA 2153251
Query 112337 CGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTG 112396
||| |||| ||||| || || ||||| ||||| || | |||||||||||
Sbjct 2153250 TCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACCATTCGCAACTCCAACCTCTG 2153191
Query 112397 TACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAAT 112456
|| || || | || | | |||||| ||||| || ||| | || || |
Sbjct 2153190 CACCGAGATTGTCGAGTACTGCGCGCCTGATGAGGTCGCTGTTTGCAACTTGGCCTCCCT 2153131
Query 112457 CGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACATTTGATTATGAAAAACTCCAC 112514
|| || || || | ||| | | |||| | || || | ||| || ||||||
Sbjct 2153130 TGCGCTGCCTTCTTACATCGAT-TACA-ACAAGGGTGTCTTCGACTTTGAGAAGCTCCAC 2153073
Query 112515 GAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCC 112574
|| || || || |||| ||||| ||||| | | ||| || |||||||
Sbjct 2153072 GAGGTCACCAAGGTTGTCGTGCGGAACCTGAACAGGATCGTCGATGTCAACCATTACCCC 2153013
Query 112575 GTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGT 112634
| ||| || || || || ||| | ||||| || ||||| |||||||||| ||
Sbjct 2153012 ATCGAGGAGGCACGGAACAGCAACATGCGTCACCGCCCGATTGGCGTCGGTGTCCAGGGG 2152953
Query 112635 CTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAA 112691
|| ||||| | ||| | |||| || | | || || || ||| || ||
Sbjct 2152952 CTTGCGGACGCGTTCCTCGCTCTTCGTATGC---CCTTCGAGTCTCCCGAGGCTCGTGAG 2152896
Query 112692 ATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTG 112751
| || || || || ||||| || || ||||| || |||||||| |||| |
Sbjct 2152895 CTGAACAAGCAGATCTTCGAGACCATTTACCACGCTGCCCTTGAGGCCTCCATGGAGCTC 2152836
Query 112752 GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTT 112811
|| |||| || || || || |||| |||||||| || | || || || | ||||
Sbjct 2152835 GCCAAGGTGGAGGGCCCTTACTCGACCTACGAGGGTTCGCCTGTCTCCCAGGGAGAGCTT 2152776
Query 112812 CAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAA 112871
|||| || |||||| | | || || | || ||||||||| | || ||||
Sbjct 2152775 CAATACGACATGTGGAACGTCAAGCCCTCCGACCTCTGGGACTGGGACACGCTGAAGGCG 2152716
Query 112872 CGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 112931
| |||||| || | ||| | || |||||||| || | || || ||||| || || |
Sbjct 2152715 CAAATCAAGCAGCATGGTGTACGGAACAGTCTGCTGCTCGCTCCTATGCCCACGGCAAGC 2152656
Query 112932 ACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987
|| | || ||| | || || || || ||||| || || |||||| | ||||||||
Sbjct 2152655 ACGTCCCAGATCCTCGGAAACAACGAGTGCTTCGAGCCGTACACGTCCAACATCTA 2152600
Score = 102 bits (112), Expect = 1e-16
Identities = 95/118 (81%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGG 102262
|| ||||| ||||||||| ||| ||||| ||| | || | |||||||||||||| ||
Sbjct 687586 GTCGAGGGCATCTTCTTCAGCGGTGCCTTC-GCGTCCATCTTCTGGCTCAAGAAGCGCGG 687528
Query 102263 TCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
|||||||| || || ||||||||||||||| ||||| || |||||||| ||||||
Sbjct 687527 CCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCCTCCAC 687470
>seq1
Length=7551078
Score = 84.2 bits (92), Expect = 3e-11
Identities = 168/246 (68%), Gaps = 10/246 (4%)
Strand=Plus/Minus
Query 163548 ATGGGCGTGTTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGG 163607
|||| || | ||||| || || || ||||| ||| || ||| | || ||||
Sbjct 4924238 ATGGCCGAATCGCGCCCCGGTCCGGCCTCGCCTCGAAGAACTTCATCGACACCGGCGCGG 4924179
Query 163608 GTGTTATTGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACA 163667
|||| ||||| |||||||| || | ||||| || | |||||||| || | ||||
Sbjct 4924178 GTGTGATTGACGCCGACTACCGCGGCCAGGTCAAGGTTCTCCTCTTCAACCACGCCGACA 4924119
Query 163668 AAGACTTTGAGGTAAAGAGGGGGGAGCGCATCGCACAACTTGTTCTTGAGAGG-TGTGAG 163726
||||||||||| ||| ||| || || ||||| || || || || ||| || | ||
Sbjct 4924118 GCGACTTTGAGGTCAAGGAGGGCGACCGGATCGCCCAGCTCGTCCTCGAGCGGATCTG-C 4924060
Query 163727 ACACCCGATGTGGAGGAAATTGGTC----TCCTTGAAGAGACGGAGAGGGGTGCGGGTGG 163782
|||||||| || |||| |||| || || |||| | |||||| || |||||
Sbjct 4924059 ACACCCGAGGTCCAGGA----GGTCCAGGAACTCGAGGAGAGCGTGAGGGGCGCCGGTGG 4924004
Query 163783 TTTTGG 163788
||| ||
Sbjct 4924003 TTTCGG 4923998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742268092240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |