Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016- 03-01] 17 sequences; 33,489,886 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=6127077 Score = 87.8 bits (96), Expect = 2e-12 Identities = 311/484 (64%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 48156 CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATA 48215 || ||||| || || || ||||||| | |||||| ||| || | |||| |||| Sbjct 2153404 CCGGGACACTCGTTGGGGCACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATG 2153463 Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCA 48275 || | ||| || ||||| || || | || | ||| | | | | || || ||||| Sbjct 2153464 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCG 2153523 Query 48276 CTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATT 48335 |||| | || || || || || | | |||||||||||| || || | ||| || Sbjct 2153524 TGATTCTTGCGGAGGTCCAGGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATG 2153583 Query 48336 GCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAA 48395 || | | || || || || || || || ||||| | ||||| ||| || ||||| | Sbjct 2153584 GCAAAGGCGCCAGGGCGCTTGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAG 2153643 Query 48396 ACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCA 48455 || | | ||| |||| ||||| || || |||| |||||||| | || ||| || Sbjct 2153644 ACGCGGAGCATGGGGATGATACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCG 2153703 Query 48456 CTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAG 48513 | || | || | ||| | || || ||||||||||| || || || | | Sbjct 2153704 GTGGCGCGAATGCGGTGGACGTTG--AGGCCAATGCCACCTGCCATCTTGGAGATCATGG 2153761 Query 48514 CACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAA 48573 | || || |||||||| || || || || || || ||||| |||||| | || | Sbjct 2153762 CGCAAGTCTTGAGGGTATCGTAGATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGA 2153821 Query 48574 AACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAA 48633 | ||| ||| | |||| ||| ||| || | || || | || || || || || Sbjct 2153822 AGCAAGAAGAGAGCTGCGCCTGAGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGG 2153881 Query 48634 TAAA 48637 |||| Sbjct 2153882 TAAA 2153885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108680551880