Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 2e-12
>seq2
Length=6127077
Score = 87.8 bits (96), Expect = 2e-12
Identities = 311/484 (64%), Gaps = 4/484 (1%)
Strand=Plus/Plus
Query 48156 CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATA 48215
|| ||||| || || || ||||||| | |||||| ||| || | |||| ||||
Sbjct 2153404 CCGGGACACTCGTTGGGGCACATCAGAGTCCAATCGCCATTCTTCTCCACTCGCTTCATG 2153463
Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCA 48275
|| | ||| || ||||| || || | || | ||| | | | | || || |||||
Sbjct 2153464 AAGAGATCGGGGATCCAGAGGGCGAGGAAGAGATCGCGGGCACGAATCTCCTCCTTGCCG 2153523
Query 48276 CTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATT 48335
|||| | || || || || || | | |||||||||||| || || | ||| ||
Sbjct 2153524 TGATTCTTGCGGAGGTCCAGGAATTCAAAGACATCAGCATGCCACGGCTCCAGATAGATG 2153583
Query 48336 GCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAA 48395
|| | | || || || || || || || ||||| | ||||| ||| || ||||| |
Sbjct 2153584 GCAAAGGCGCCAGGGCGCTTGTTCCCGCCCTGATCGACATATCGGGCGGTGTTGTTGAAG 2153643
Query 48396 ACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCA 48455
|| | | ||| |||| ||||| || || |||| |||||||| | || ||| ||
Sbjct 2153644 ACGCGGAGCATGGGGATGATACCGTTCGAGGTACCGTTGGTTCCGGCGATGTAAGAACCG 2153703
Query 48456 CTAGCTCTTAT--ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAG 48513
| || | || | ||| | || || ||||||||||| || || || | |
Sbjct 2153704 GTGGCGCGAATGCGGTGGACGTTG--AGGCCAATGCCACCTGCCATCTTGGAGATCATGG 2153761
Query 48514 CACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAA 48573
| || || |||||||| || || || || || || ||||| |||||| | || |
Sbjct 2153762 CGCAAGTCTTGAGGGTATCGTAGATGCCCTCAATGCTGTCATCCTTCATATCGACAAGGA 2153821
Query 48574 AACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAA 48633
| ||| ||| | |||| ||| ||| || | || || | || || || || ||
Sbjct 2153822 AGCAAGAAGAGAGCTGCGCCTGAGGAGTACCGGCGTTGAAGAGAGTGGGGGAGGCGTGGG 2153881
Query 48634 TAAA 48637
||||
Sbjct 2153882 TAAA 2153885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108680551880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |