Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1 123 2e-23
seq4 89.7 4e-13
>seq1
Length=7551078
Score = 123 bits (136), Expect = 2e-23
Identities = 235/341 (69%), Gaps = 10/341 (3%)
Strand=Plus/Plus
Query 30048 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCAC 30104
||||||||| ||| ||||||||||| ||| | || || ||| | || || |||
Sbjct 1537607 GTTCCAGGCCGACATGATGATGCGCCGGTCGTAGGGATTCGTCCGTAGTTTGTGGATCAC 1537666
Query 30105 GGCGTTTTGCA-GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACT 30163
|| ||| |||| |||||||| |||| | |||||| | | | || ||||
Sbjct 1537667 CTCG----GCAAGCTGGTCCACCCCTTTCCCGGTGTAGTCCGTCTTTGCATCAACATACT 1537722
Query 30164 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30223
| || || || |||| ||| |||||||| ||||| || || ||||| || | || | ||
Sbjct 1537723 CGGCACCAAAGTGCCGCCATTGGAACCCATACACGGGGCCTAGGTCGCCGACCTCGCGGT 1537782
Query 30224 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30283
|| || ||| |||||||| | || | ||| || ||| | ||||||||||| || |
Sbjct 1537783 GCGAGAGGCCAACCTTGTCCAGGTACTCGCGGGACCCATTGCCATCCCAGATCTTGACGC 1537842
Query 30284 CCTTCTCGGAGAGCTCTTTGGAGTTTGTG-GACCCTCTGACGAACCACAGCAGCTCCTCC 30342
| || ||| |||| | ||||| ||| |||||| | |||||| |||| ||| |
Sbjct 1537843 CTTTTTCGCTGAGCGCGATGGAGGAGGTGTTGCCCTCT-ATGAACCAGAGCAACTCGGCG 1537901
Query 30343 ACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
|| || || ||| | ||||| | ||| || || ||||| ||
Sbjct 1537902 ACCACAGCTTTCAAGAAGACTCGCTTCGTGGTTAGGAGTGG 1537942
>seq4
Length=3495652
Score = 89.7 bits (98), Expect = 4e-13
Identities = 141/195 (72%), Gaps = 8/195 (4%)
Strand=Plus/Plus
Query 52002 GACGGCAAGAAGCTCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGAC 52061
||||||| |||| |||||| || | | ||||| ||| ||| |||| ||||||
Sbjct 457283 GACGGCATGAAGTACGTCAAAGTCCGCGTCAGGACGACCAAAATCCCGCAGATTGGCGAC 457342
Query 52062 AAGTTTGCGTCG-TTCACGGCGCAAAAGGGGACGTGCG--GAGCCGTCCTGACCCAGGAG 52118
||||| |||||| ||||| ||||||||| ||| || | | ||| | | ||||||
Sbjct 457343 AAGTTCGCGTCGCGCCACGG-GCAAAAGGGCACGATCGGCGTGACGTACCG--GCAGGAG 457399
Query 52119 GACATGCCCTTCGACAAG-GACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTT 52177
|||||||||||| || | || || | || || ||| |||| || ||||| |||||| |
Sbjct 457400 GACATGCCCTTC-ACGCGCGAGGGCATCGTTCCGGACATCATTATTAACCCGCACGCCAT 457458
Query 52178 TCCATCCAGGATGAC 52192
|| ||| | |||||
Sbjct 457459 CCCCTCCCGAATGAC 457473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617515339541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |