Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Basipetospora_20chlamydospora_20[genbank_20GCA_5F001599675.1_202016-
03-01] 17 sequences; 33,489,886 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq5 107 1e-18
seq1 84.2 2e-11
>seq5
Length=3107351
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
||||| | ||||| | || | ||| ||||| ||| || || || |||||||| ||
Sbjct 1009772 CCGCCGCGAAGCCGAAGGACGAGATGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAG 1009831
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || |||| || | |||||| ||||| || || || ||||| ||||||| ||||
Sbjct 1009832 AGGGTGCGCCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 1009891
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||||||||||| ||| || || || | | | | ||||| | ||||||
Sbjct 1009892 ATACCCTCCTTGTCCTGAATTTTGCTCTTCACGTTATCGATGGTATCTGAGGATTCCACC 1009951
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| ||| || || || || ||||| || || || || ||||||||
Sbjct 1009952 TCCAGCGTGATAGTCTTCCCAGTCAACGTCTTCACGAAGATCTGCAT 1009998
Score = 100 bits (110), Expect = 2e-16
Identities = 88/110 (80%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || |||||||| || || || ||||||||||| || | || |||| |||| ||||
Sbjct 1010024 TGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGGCCGTCCTCCAGCTGC 1010083
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| ||||| || || || ||||| ||||||| ||||| ||||||||||||
Sbjct 1010084 TTTCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTGTC 1010133
>seq1
Length=7551078
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||| | || || || ||| || || || ||||| || || || | ||
Sbjct 7246766 AGACGCAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGG 7246707
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| ||||| || ||||| ||||| ||||| | ||| | |||||||
Sbjct 7246706 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGCCCTCC 7246647
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | || || || | ||| ||||| | ||
Sbjct 7246646 TTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCGACCTCGAGGGTG 7246587
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769
|| || || ||||| | || || || || |||||||| ||
Sbjct 7246586 ATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGGT 7246546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380937521074491
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |